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ModelSEED

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  1. ModelSEEDDatabase ModelSEEDDatabase Public

    This repository contains the definitive copy of the biochemistry and metadata used to construct models using the ModelSEED/ProbAnno approach

    HTML 51 38

  2. Model-SEED-core Model-SEED-core Public archive

    The Model SEED is a tool for building, curating, and analyzing gonome-scale metabolic models. Visit the Model SEED homepage for installation instructions and full feature documentation.

    Perl 19 10

  3. ModelSEEDpy ModelSEEDpy Public

    Python package for building and analyzing models using ModelSEED

    Python 17 15

  4. ModelSEED-UI ModelSEED-UI Public

    ModelSEED UI (beta)

    HTML 6 7

  5. PlantSEED PlantSEED Public

    Repository for containing code and files that pertain to the use of PlantSEED in the ModelSEED environment

    Perl 6 7

  6. ModelSeedApi ModelSeedApi Public

    Application Programming Interface to the Model Seed

    Perl 4 1

Repositories

Showing 10 of 42 repositories
  • ModelSEED/MicrobiomeNotebooks’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jul 2, 2024
  • ModelSEEDDatabase Public

    This repository contains the definitive copy of the biochemistry and metadata used to construct models using the ModelSEED/ProbAnno approach

    ModelSEED/ModelSEEDDatabase’s past year of commit activity
    HTML 51 38 21 2 Updated Jun 28, 2024
  • ModelSEED/ModelSEED2Notebooks’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jun 23, 2024
  • ModelSEEDpy Public

    Python package for building and analyzing models using ModelSEED

    ModelSEED/ModelSEEDpy’s past year of commit activity
    Python 17 MIT 15 5 4 Updated Jun 4, 2024
  • PlantSEED Public

    Repository for containing code and files that pertain to the use of PlantSEED in the ModelSEED environment

    ModelSEED/PlantSEED’s past year of commit activity
    Perl 6 7 13 0 Updated May 15, 2024
  • KB-ModelSEEDCommunity Public

    KBase SDK module for community modeling apps created and managed by the ModelSEED team

    ModelSEED/KB-ModelSEEDCommunity’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Apr 3, 2024
  • ModelSEED/KB-ModelSEEDReconstruction’s past year of commit activity
    Jupyter Notebook 2 MIT 1 0 0 Updated Apr 1, 2024
  • ModelSEED/KBaseNotebooks’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Mar 26, 2024
  • ModelSEED/OntologyNotebooks’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Mar 14, 2024
  • ModelSEED-UI Public

    ModelSEED UI (beta)

    ModelSEED/ModelSEED-UI’s past year of commit activity
    HTML 6 MIT 7 27 6 Updated Feb 13, 2024

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