A set of tools used to analyze myofibril formation and growth
To measure a sarcomere's length or myofibril width, use the macro "Myofibril_Width_Length_FIJI.ijm" in FIJI. This program will prompt you for next steps. Then, process the resulting data in MatLab using the script "Myofibril_Width_Length_MatLab" This data can also be processed manually in excel with just a few extra steps.
To measure image brightness use the macro "GrayscaleMacro_FIJI" in FIJI. This program will prompt you for next steps. Then, process the resulting data in MatLab using the script "MeanGrayscale_MatLab" This data can also be processed manually in excel with just a few extra steps.