Tripal eutils.module.fix

[dsenalik]

Pull request for Issue #228

The missing parameter (an empty array) is added to the call to tripal_report_error()

[dsenalik]

Sorry for the mess of commits, there is only one small change actually made

[dsenalik]

I added a second change to define a default assembly method is none was specified, needed because there is a NOT NULL constraint on the program and programversion columns in the chado.analysis table.
This problem showed up on NCBI assembly GCA_902728035.1 which is what triggered my discovery of the first error.

[mpoelchau]

Thanks @dsenalik, I think the placeholder text that you added is good. The next question would be how to work with NCBI and the submitters to add a method, but that's out of scope of this module...

Thanks for submitting the PR!

[dsenalik]

Check has failed on a request to NCBI. I am occasionally getting timeouts locally on requests to NCBI. Maybe we can rerun the checks again later?

1. Tests\EUtilsTest::testConvertingAccession with data set flexibly parsing attributes, child values, child attributes, while dealing with key name overlap #5 ('biosample', 'SAMN02981385', '2981385')
   Exception: ERROR Could not make request: Status: 400