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CMEPS Sync with Trigrid capability #122

Merged
merged 682 commits into from
Jul 26, 2024
Merged

CMEPS Sync with Trigrid capability #122

merged 682 commits into from
Jul 26, 2024
This pull request is big! We’re only showing the most recent 250 commits.

Commits on May 19, 2023

  1. resolve circular dependancy

    @jedwards4b
    jedwards4b committed May 19, 2023
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  2. remove CESMCOUPLED cppdef

    @jedwards4b
    jedwards4b committed May 19, 2023
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  3. pass the strict ext build test

    @jedwards4b
    jedwards4b committed May 19, 2023
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  4. rework based on pr review

    @jedwards4b
    jedwards4b committed May 19, 2023
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  5. fix yaml syntax

    @jedwards4b
    jedwards4b committed May 19, 2023
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  6. fix ext versions

    @jedwards4b
    jedwards4b committed May 19, 2023
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  7. fix ext versions

    @jedwards4b
    jedwards4b committed May 19, 2023
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Commits on May 23, 2023

  1. add ispresent and isset

    @jedwards4b
    jedwards4b committed May 23, 2023
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  2. make xgrid default (should have been in alpha12c) and fix sw flux to … 

    …mom ocn
    @jedwards4b
    jedwards4b committed May 23, 2023
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  3. slight change in logic

    @jedwards4b
    jedwards4b committed May 23, 2023
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Commits on May 24, 2023

  1. get ufs to work w/ ocnalb 

    * remove swnet to ocean from custom_nems
* set optional use of nextswday
* get med history working w/o aofluxes
    @DeniseWorthen
    DeniseWorthen committed May 24, 2023
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  2. fix src path for cdeps

    @jedwards4b
    jedwards4b committed May 24, 2023
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  3. Merge pull request ESCOMP#387 from jedwards4b/fix_aoflux_and_swtoocn 

    make xgrid default and fix sw flux to mom ocn
    @jedwards4b
    jedwards4b committed May 24, 2023
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  4. cdeps path again

    @jedwards4b
    jedwards4b committed May 24, 2023
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  5. cdeps path again

    @jedwards4b
    jedwards4b committed May 24, 2023
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  6. try building ext with cdeps share

    @jedwards4b
    jedwards4b committed May 24, 2023
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  7. Merge pull request ESCOMP#386 from jedwards4b/add_check_for_nans_conf… 

    …ig_option

Add check for nans config option
    @jedwards4b
    jedwards4b committed May 24, 2023
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  8. Merge remote-tracking branch 'ESCOMP/main' into feature/updcmeps

    @DeniseWorthen
    DeniseWorthen committed May 24, 2023
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Commits on May 26, 2023

  1. testing indicates we are not yet ready for xgrid

    @jedwards4b
    jedwards4b committed May 26, 2023
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  2. Merge pull request ESCOMP#388 from jedwards4b/revert_aoflux_to_ogrid 

    testing indicates we are not yet ready for xgrid
    @jedwards4b
    jedwards4b committed May 26, 2023
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  3. remove file accidentally committed

    @DeniseWorthen
    DeniseWorthen committed May 26, 2023
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Commits on May 30, 2023

  1. add config variables for ufs use case

    @DeniseWorthen
    DeniseWorthen committed May 30, 2023
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Commits on May 31, 2023

  1. Merge branch 'feature/updcmeps' into feature/fixsw

    @DeniseWorthen
    DeniseWorthen committed May 31, 2023
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Commits on Jun 12, 2023

  1. add configuration options for albedo calcs 

    * flux_albav moved to _init
* use_nextswcday for using clock instead of scalar field
* min_albedo for setting min albedo used max(min_albedo,....)
* giving a min_albedo value sets logical use_min_albedo, otherwise
false and min_albedo=0
* set mean albdif and albdir via config. If not present, defaults to
current values
    @DeniseWorthen
    DeniseWorthen committed Jun 12, 2023
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Commits on Jun 14, 2023

  1. Merge branch 'emc/develop' into feature/fixsw

    @DeniseWorthen
    DeniseWorthen committed Jun 14, 2023
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Commits on Jun 23, 2023

  1. both =0 is not an error

    @jedwards4b
    jedwards4b committed Jun 23, 2023
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Commits on Jul 10, 2023

  1. Merge pull request ESCOMP#392 from jedwards4b/fixforhighpecnt 

    both =0 is not an error
    @jedwards4b
    jedwards4b committed Jul 10, 2023
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Commits on Jul 24, 2023

  1. add surface flux rollover

    @jedwards4b
    jedwards4b committed Jul 24, 2023
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Commits on Jul 25, 2023

  1. Merge branch 'NOAA-EMC:emc/develop' into feature/fixsw

    @DeniseWorthen
    DeniseWorthen committed Jul 25, 2023
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Commits on Jul 27, 2023

  1. remove TODOs

    @DeniseWorthen
    DeniseWorthen committed Jul 27, 2023
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  2. use log_error, not log_info

    @DeniseWorthen
    DeniseWorthen committed Jul 27, 2023
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  3. remove TODO

    @DeniseWorthen
    DeniseWorthen committed Jul 27, 2023
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Commits on Jul 28, 2023

  1. fix the x case

    @jedwards4b
    jedwards4b committed Jul 28, 2023
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Commits on Jul 29, 2023

  1. add missing return error check for FldsExchange

    @DeniseWorthen
    DeniseWorthen committed Jul 29, 2023
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Commits on Jul 31, 2023

  1. address comments

    @DeniseWorthen
    DeniseWorthen committed Jul 31, 2023
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  2. alternate solution for X case

    @jedwards4b
    jedwards4b committed Jul 31, 2023
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Commits on Aug 1, 2023

  1. update esmf and pio externals used in srt github workflow

    @jedwards4b
    jedwards4b committed Aug 1, 2023
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  2. debug workflow

    @jedwards4b
    jedwards4b committed Aug 1, 2023
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  3. try adding SRCROOT env variable

    @jedwards4b
    jedwards4b committed Aug 1, 2023
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  4. remove rof_name

    @jedwards4b
    jedwards4b committed Aug 1, 2023
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Commits on Aug 2, 2023

  1. Merge pull request ESCOMP#397 from jedwards4b/xcase_fix 

    fix the x case
    @jedwards4b
    jedwards4b committed Aug 2, 2023
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Commits on Aug 4, 2023

  1. Merge branch 'main' into feature/fixsw

    @jedwards4b
    jedwards4b committed Aug 4, 2023
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Commits on Aug 7, 2023

  1. Merge branch 'main' into add_gpu_gust

    @sjsprecious
    sjsprecious committed Aug 7, 2023
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  2. revert changes for swnet in prep_ocn

    @DeniseWorthen
    DeniseWorthen committed Aug 7, 2023
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Commits on Aug 8, 2023

  1. Add a new XML variable to apply the MPI wrapper script more generically.

    @sjsprecious
    sjsprecious committed Aug 8, 2023
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Commits on Aug 9, 2023

  1. Merge pull request ESCOMP#363 from sjsprecious/add_gpu_gust 

    Add new XML variables for flexible controls of GPU configuration
    @jedwards4b
    jedwards4b committed Aug 9, 2023
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Commits on Aug 11, 2023

  1. Merge pull request ESCOMP#395 from DeniseWorthen/feature/fixsw 

    implement ocean albedos for UFS
    @jedwards4b
    jedwards4b committed Aug 11, 2023
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Commits on Aug 21, 2023

  1. Add length to logic format.

    @fischer-ncar
    fischer-ncar committed Aug 21, 2023
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  2. Merge pull request ESCOMP#403 from fischer-ncar/logic_length_nag 

    Add length to logic format descriptor, needed for nag.
    @jedwards4b
    jedwards4b committed Aug 21, 2023
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Commits on Sep 1, 2023

  1. Merge branch 'main' into sfcflxrollover

    @jedwards4b
    jedwards4b committed Sep 1, 2023
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Commits on Sep 29, 2023

  1. update for se scm

    @jtruesdal
    jtruesdal committed Sep 29, 2023
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Commits on Oct 7, 2023

  1. Merge remote-tracking branch 'upstream/emc/develop' into feature/emc_… 

    …updates
    @DeniseWorthen
    DeniseWorthen committed Oct 7, 2023
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Commits on Oct 10, 2023

  1. Merge pull request ESCOMP#411 from DeniseWorthen/feature/emc_updates 

    UFS-specific modifications
    @jedwards4b
    jedwards4b committed Oct 10, 2023
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  2. fix hang on abort issue

    @jedwards4b
    jedwards4b committed Oct 10, 2023
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Commits on Oct 11, 2023

  1. Merge pull request ESCOMP#394 from jedwards4b/sfcflxrollover 

    add surface flux rollover
    @jedwards4b
    jedwards4b committed Oct 11, 2023
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  2. Merge pull request ESCOMP#412 from jedwards4b/abort_bugfix 

    fix hang on abort issue
    @jedwards4b
    jedwards4b committed Oct 11, 2023
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Commits on Oct 12, 2023

  1. support for job_priority on derecho

    @jedwards4b
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Commits on Oct 13, 2023

  1. Merge pull request ESCOMP#413 from jedwards4b/derecho_priority 

    support for job_priority on derecho
    @jedwards4b
    jedwards4b committed Oct 13, 2023
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Commits on Oct 23, 2023

  1. remove this unused variable

    @jedwards4b
    jedwards4b committed Oct 23, 2023
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Commits on Oct 25, 2023

  1. initial work for inline cdeps

    @uturuncoglu
    uturuncoglu committed Oct 25, 2023
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Commits on Oct 27, 2023

  1. more work for cdeps inline

    @uturuncoglu
    uturuncoglu committed Oct 27, 2023
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Commits on Nov 2, 2023

  1. more work for inline

    @uturuncoglu
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Commits on Nov 6, 2023

  1. Merge pull request ESCOMP#417 from jedwards4b/remove_esmf_logfile_kind 

    remove this unused variable
    @jedwards4b
    jedwards4b committed Nov 6, 2023
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Commits on Nov 7, 2023

  1. use esmf config file to get stream information

    @uturuncoglu
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  2. more work for inline capability

    @uturuncoglu
    uturuncoglu committed Nov 7, 2023
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  3. Merge remote-tracking branch 'ESCOMP/main' into feature/emc_updates

    @DeniseWorthen
    DeniseWorthen committed Nov 7, 2023
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  4. Merge pull request ESCOMP#418 from DeniseWorthen/feature/emc_updates 

    Rename ufs related coupling modes; replace nems with ufs
    @jedwards4b
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Commits on Nov 9, 2023

  1. enabling setting source and destination mask for interpolation

    @uturuncoglu
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Commits on Nov 11, 2023

  1. more work for cdeps inline

    @uturuncoglu
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Commits on Nov 12, 2023

  1. more work for cmeps and cdeps inline integration

    @uturuncoglu
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Commits on Nov 15, 2023

  1. add atm->ocn direction for cdeps inline capability

    @uturuncoglu
    uturuncoglu committed Nov 15, 2023
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Commits on Nov 16, 2023

  1. activate cdeps inline capability for atm->wav

    @uturuncoglu
    uturuncoglu committed Nov 16, 2023
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Commits on Nov 22, 2023

  1. more changes for derecho

    @jedwards4b
    jedwards4b committed Nov 22, 2023
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Commits on Nov 26, 2023

  1. Merge tag 'cmeps0.14.43' into cmeps0.14.43_scamdev 

    cmeps0.14.43
    @jtruesdal
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Commits on Dec 14, 2023

  1. remove the SMP_PRESENT variable and replace with BUILD_THREADED

    @jedwards4b
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Commits on Dec 15, 2023

  1. Merge pull request ESCOMP#419 from jedwards4b/update_testlist 

    more changes for derecho
    @jedwards4b
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  2. Merge pull request ESCOMP#421 from jedwards4b/remove_smp_present 

    remove the SMP_PRESENT variable and replace with BUILD_THREADED
    @jedwards4b
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Commits on Dec 19, 2023

  1. Add modifications to compute gust addition to U10 and control with a … 

    …namelist
    @megandevlan
    megandevlan committed Dec 19, 2023
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Commits on Dec 20, 2023

  1. Fix shr_flux comments and cdn calculation

    @megandevlan
    megandevlan committed Dec 20, 2023
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Commits on Dec 21, 2023

  1. update github tests

    @jedwards4b
    jedwards4b committed Dec 21, 2023
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  2. fix testing issues

    @jedwards4b
    jedwards4b committed Dec 21, 2023
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  3. fixing tests

    @jedwards4b
    jedwards4b committed Dec 21, 2023
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  4. add check for cam_dev if add_gusts is true

    @jedwards4b
    jedwards4b committed Dec 21, 2023
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  5. add check for cam_dev

    @jedwards4b
    jedwards4b committed Dec 21, 2023
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  6. another reference to gust outside of cesm code

    @jedwards4b
    jedwards4b committed Dec 21, 2023
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  7. debug tests

    @jedwards4b
    jedwards4b committed Dec 21, 2023
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  8. add submodule command

    @jedwards4b
    jedwards4b committed Dec 21, 2023
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  9. add submodule command complication

    @jedwards4b
    jedwards4b committed Dec 21, 2023
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  10. Merge pull request NOAA-EMC#1 from jedwards4b/gustMods 

    Gust mods suggested changes for cam_dev
    @megandevlan
    megandevlan committed Dec 21, 2023
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  11. Merge pull request ESCOMP#422 from megandevlan/gustMods 

    Add convective gust contribution to U10
    @jedwards4b
    jedwards4b committed Dec 21, 2023
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  12. turn add_gusts on by default for camdev

    @jedwards4b
    jedwards4b committed Dec 21, 2023
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Commits on Dec 22, 2023

  1. Merge pull request ESCOMP#424 from jedwards4b/gust_on_for_camdev 

    turn add_gusts on by default for camdev
    @jedwards4b
    jedwards4b committed Dec 22, 2023
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Commits on Dec 27, 2023

  1. For T compsets, only run GLC if med_to_glc is true 

    This makes the logic for running GLC consistent with runseq_general.py.
This change is relevant for the unusual case where a T compset (CISM
forced by dlnd) is being run with CISM in noevolve mode: in this case,
we don't want to run CISM, and trying to run CISM leads to incorrect
behavior in a restart case (which is how this issue was detected).

With this change,
ERS_D_Ly3.f09_g17_gris4.T1850Gg.derecho_intel.cism-noevolve passes.
    @billsacks
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Commits on Dec 28, 2023

  1. feature to use all data in the first coupling timestep

    @uturuncoglu
    uturuncoglu committed Dec 28, 2023
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Commits on Dec 29, 2023

  1. Merge remote-tracking branch 'upstream/main' into feature/inline

    @uturuncoglu
    uturuncoglu committed Dec 29, 2023
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Commits on Jan 5, 2024

  1. fix for gust additions in the aoflux

    @uturuncoglu
    uturuncoglu committed Jan 5, 2024
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  2. Merge remote-tracking branch 'fork/emc/develop' into feature/inline

    @uturuncoglu
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Commits on Jan 15, 2024

  1. mods for regional mom6 configuration

    @uturuncoglu
    uturuncoglu committed Jan 15, 2024
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Commits on Jan 17, 2024

  1. fix for sw bands calculation for cases without sea-ice

    @uturuncoglu
    uturuncoglu committed Jan 17, 2024
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Commits on Jan 19, 2024

  1. more work for regional mom6 coupling

    @uturuncoglu
    uturuncoglu committed Jan 19, 2024
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  2. update for hafs.mom6

    @uturuncoglu
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Commits on Jan 20, 2024

  1. switch TOTAL to SELECT for other interpolation types too

    @uturuncoglu
    uturuncoglu committed Jan 20, 2024
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Commits on Jan 25, 2024

  1. fix from Denise for crash when diagnose is on by initializing

    @uturuncoglu
    uturuncoglu committed Jan 25, 2024
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Commits on Jan 26, 2024

  1. Merge pull request ESCOMP#425 from billsacks/fix_runseq_t_noevolve 

    For T compsets, only run GLC if med_to_glc is true
    @jedwards4b
    jedwards4b committed Jan 26, 2024
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Commits on Jan 27, 2024

  1. fix issue arised in CESM testing

    @uturuncoglu
    uturuncoglu committed Jan 27, 2024
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Commits on Jan 28, 2024

  1. Merge remote-tracking branch 'noaa-emc/emc/develop' into feature/inline

    @uturuncoglu
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Commits on Jan 29, 2024

  1. fix Faxa_rainc issue when add_gusts is turned on

    @uturuncoglu
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  2. fix comments mean -> inst and minor typo

    @uturuncoglu
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Commits on Jan 30, 2024

  1. minor fix - remove trim

    @uturuncoglu
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  2. srt does not work with most recent cime, cmeps requires most recent c… 

    …deps
    @jedwards4b
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  3. fix srt test

    @jedwards4b
    jedwards4b committed Jan 30, 2024
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  4. fix cime checkout

    @jedwards4b
    jedwards4b committed Jan 30, 2024
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  5. turn off tmate

    @jedwards4b
    jedwards4b committed Jan 30, 2024
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  6. fix path

    @jedwards4b
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Commits on Jan 31, 2024

  1. debug workflow

    @jedwards4b
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  2. give format a length

    @jedwards4b
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  3. Merge pull request ESCOMP#420 from uturuncoglu/feature/inline 

    CMEPS PR for CDEPS Inline implementation
    @jedwards4b
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  4. fix dummy arguments w/o values

    @DeniseWorthen
    DeniseWorthen committed Jan 31, 2024
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Commits on Feb 5, 2024

  1. Merge branch 'NOAA-EMC:emc/develop' into feature/nowarn

    @DeniseWorthen
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Commits on Feb 8, 2024

  1. Initial add of code to handle dust emissions, as per the document htt… 

    …ps://docs.google.com/document/d/18nZ3LJF5W-YF9iBhqed6s_NWeKOvSSL2-k0Lye1nnLg/, HAS NOT BEEN TESTED
    @ekluzek
    ekluzek committed Feb 8, 2024
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Commits on Feb 29, 2024

  1. fix leap day issue

    @jedwards4b
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Commits on Mar 3, 2024

  1. add cpl_scalar for tiled grids, other minor fixes 

    * add new cpl_scalar for mediator history files for tiled
gridded domains, eg cube-sphere. Replaces existing use of
config variables which restricted the use to 6-tiles domain
* remove unnecessary trims, fix minor typos and indentation
    @DeniseWorthen
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  2. Merge remote-tracking branch 'ESCOMP/main' into feature/cplscalars

    @DeniseWorthen
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  3. Merge remote-tracking branch 'origin/feature/nowarn' into feature/cpl… 

    …scalars
    @DeniseWorthen
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  4. set ntile=0 when ntile scalar doesn't exist

    @DeniseWorthen
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Commits on Mar 4, 2024

  1. fix restarts when ntile>0

    @DeniseWorthen
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Commits on Mar 12, 2024

  1. Run MED -> GLC in CISM NOEVOLVE mode 

    Previously we hadn't been doing the mapping from MED -> GLC when CISM
was running in NOEVOLVE mode. This was a problem because this downscaled
SMB is one of the main benefits of running CISM in NOEVOLVE mode.

Resolves ESCOMP#426. See that issue for details.

One other change here is that I skip GLC -> MED in NOEVOLVE mode. I
*think* that's a safe thing to do, but I'm not 100% sure of it.
    @billsacks
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Commits on Mar 13, 2024

  1. Merge pull request ESCOMP#439 from jtruesdal/cmeps0.14.43_scamdev 

    Add unstructured grid support for use with new Spectral Elements SCAM
    @jedwards4b
    jedwards4b committed Mar 13, 2024
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  2. add two fixes 

    * testing of this feature w/ UFS noahmp lnd component, which currently
runs on the CSG, found two issues. One to write the mediator fractions
and areas on the tiles when using the single history file. A second fix
is the mapping masking for lnd-atm coupling in UFS.
    @DeniseWorthen
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  3. modify dstmask for lnd->atm in UFS

    @DeniseWorthen
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Commits on Mar 14, 2024

  1. Update U10 to be resolved wind; add variable for U10+gusts

    @megandevlan
    megandevlan committed Mar 14, 2024
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Commits on Mar 15, 2024

  1. Merge tag 'cmeps0.14.50' into dust_emis_mod 

    cmeps0.14.50
    @ekluzek
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Commits on Mar 19, 2024

  1. Merge pull request ESCOMP#436 from DeniseWorthen/feature/cplscalars 

    Add index to cpl_scalars to allow CSG or regional (single tile) mediator history files for ATM component in UFS
    @jedwards4b
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Commits on Mar 20, 2024

  1. Do GLC -> MED based on med_to_glc rather than run_glc 

    When this was based on run_glc, NOEVOLVE cases were failing like this:

20240319 135112.648 ERROR            PET0000 ESMF_ArrayGet.F90:1949 ESMF_ArrayGetFPtr Object being used before creation  - Bad Object
20240319 135112.649 ERROR            PET0000 ESMF_FieldGet.F90:2634 ESMF_FieldGetDataPtr Object being used before creation  - Internal subroutine call returned Error
20240319 135112.649 ERROR            PET0000 nuopc_shr_methods.F90:304 Object being used before creation  - Passing error in return code
20240319 135112.649 ERROR            PET0000 glc_import_export.F90:475 Object being used before creation  - Passing error in return code
20240319 135112.649 ERROR            PET0000 glc_comp_nuopc.F90:481 Object being used before creation  - Passing error in return code
20240319 135112.649 ERROR            PET0000 ESM0001:src/addon/NUOPC/src/NUOPC_Driver.F90:2901 Object being used before creation  - Phase 'IPDv01p3' Initialize for modelComp 3: GLC did not return ESMF_SUCCESS
20240319 135112.649 ERROR            PET0000 ESM0001:src/addon/NUOPC/src/NUOPC_Driver.F90:1985 Object being used before creation  - Passing error in return code
20240319 135112.649 ERROR            PET0000 ensemble:src/addon/NUOPC/src/NUOPC_Driver.F90:2901 Object being used before creation  - Phase 'IPDv02p3' Initialize for modelComp 1: ESM0001 did not return ESMF_SUCCESS
20240319 135112.649 ERROR            PET0000 ensemble:src/addon/NUOPC/src/NUOPC_Driver.F90:1990 Object being used before creation  - Passing error in return code
20240319 135112.649 ERROR            PET0000 ensemble:src/addon/NUOPC/src/NUOPC_Driver.F90:489 Object being used before creation  - Passing error in return code
20240319 135112.649 ERROR            PET0000 esmApp.F90:134 Object being used before creation  - Passing error in return code
20240319 135112.649 INFO             PET0000 Finalizing ESMF

This fails in the InitializeRealize call to export_fields, and
specifically in this:

       ! Set scalars in export state
       call State_SetScalar(dble(get_nx_tot(instance_index=ns)), flds_scalar_index_nx, &
            NStateExp(ns), flds_scalar_name, flds_scalar_num, rc)

So it seems like we need to have GLC -> MED in the run sequence for
initialization to work correctly.
    @billsacks
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Commits on Mar 26, 2024

  1. Fix calculation of gustiness

    @megandevlan
    megandevlan committed Mar 26, 2024
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  2. Merge branch 'main' into mdfowler/gustMods_updateU10

    @jedwards4b
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  3. Merge pull request ESCOMP#440 from megandevlan/mdfowler/gustMods_upda… 

    …teU10

Update U10 to be resolved wind; add variable for U10+gusts
    @jedwards4b
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  4. Merge pull request ESCOMP#435 from jedwards4b/fix/leapday 

    fix leap day issue
    @jedwards4b
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Commits on Mar 27, 2024

  1. changes needed for adding a dglc component

    Mariana Vertenstein committed Mar 27, 2024
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  2. fixes an issue with symbols in compset names on derecho

    @jedwards4b
    jedwards4b committed Mar 27, 2024
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  3. clean up

    @jedwards4b
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Commits on Mar 28, 2024

  1. Merge pull request ESCOMP#444 from jedwards4b/fix/symbolsincompsetname 

    fixes an issue with symbols in compset names on derecho
    @jedwards4b
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  2. Merge branch 'main' into feature/add_dglc

    Mariana Vertenstein committed Mar 28, 2024
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Commits on Mar 29, 2024

  1. changes to add compatibility with NorESM requirements

    Mariana Vertenstein committed Mar 29, 2024
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  2. restructured fd_cesm.yaml so that sections make sense and description… 

    … is relative to the mediator (as is the case with history and restart files)
    Mariana Vertenstein committed Mar 29, 2024
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  3. Merge branch 'fix/symbolsincompsetname' into HEAD

    @jedwards4b
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  4. fix for add_gusts when coldair_outbreak_mod = .true.

    @jedwards4b
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Commits on Mar 30, 2024

  1. updated to upcoming ESCOMP#442

    Mariana Vertenstein committed Mar 30, 2024
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  2. Merge branch 'feature/add_dglc_sacks' into feature/add_dglc

    Mariana Vertenstein committed Mar 30, 2024
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  3. updated coupling interval setting for dglc

    Mariana Vertenstein committed Mar 30, 2024
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  4. updated namelist_definition_drv.xml to bring in new wav2med auxiliary… 

    … history file capability
    Mariana Vertenstein committed Mar 30, 2024
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  5. Output downscaled glacier data in cpl glc hist file (ESCOMP#441) 

    * export state to glc added to lnd2glc auxiliary file
* Remove unused variable to appease github actions
Co-authored-by: Mariana Vertenstein <marianav@met.no>
    @Katetc
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Commits on Apr 1, 2024

  1. Merge pull request ESCOMP#446 from jedwards4b/fix/add_gusts 

    Fix/add gusts
    @jedwards4b
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Commits on Apr 2, 2024

  1. remove ESMF_GridCompGetInternalState from use statement, not working … 

    …with nag and apparently not needed
    @jedwards4b
    jedwards4b committed Apr 2, 2024
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  2. fix format error

    @jedwards4b
    jedwards4b committed Apr 2, 2024
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  3. need to allocate even though it is not used - nag

    @jedwards4b
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  4. Merge pull request ESCOMP#449 from jedwards4b/fix/remove_use_ESMF_Gri… 

    …dCompGetInternalState

remove  ESMF_GridCompGetInternalState from use statement, not working…
    @jedwards4b
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Commits on Apr 3, 2024

  1. Merge branch 'main' into feature/add_dglc

    @mvertens
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Commits on Apr 4, 2024

  1. fix internal ESMF divide by 0 error

    @jedwards4b
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Commits on Apr 9, 2024

  1. Merge pull request ESCOMP#445 from mvertens/feature/add_dglc 

    Changes for the addition of a new dglc component
    @jedwards4b
    jedwards4b committed Apr 9, 2024
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  2. Get to compile with nag compiler on izumi

    @ekluzek
    ekluzek committed Apr 9, 2024
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Commits on Apr 11, 2024

  1. Merge remote-tracking branch 'ESCOMP/main' into bugfix/aoflux4ufs

    @DeniseWorthen
    DeniseWorthen committed Apr 11, 2024
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  2. fix aoflux routine for ufs

    @DeniseWorthen
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Commits on Apr 24, 2024

  1. changes for adding multi-level docn input to cdeps

    Mariana Vertenstein committed Apr 24, 2024
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  2. implemented correct mapping of multi-level ocean to glc

    Mariana Vertenstein committed Apr 24, 2024
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Commits on Apr 26, 2024

  1. Remove ESMF in favor of shr_mpi_mod, it is simpler this way, this als… 

    …o allows me to do unit-testing easier
    @ekluzek
    ekluzek committed Apr 26, 2024
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  2. Merge branch 'dust_emis_mod' of github.com:ekluzek/CMEPS into dust_em… 

    …is_mod

 Conflicts:
	cesm/nuopc_cap_share/shr_dust_emis_mod.F90
    @ekluzek
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Commits on Apr 30, 2024

  1. Add somethings needed for unit-testing and fix things identified there

    @ekluzek
    ekluzek committed Apr 30, 2024
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  2. CAM%DEV changed to CAM70

    @brian-eaton
    brian-eaton committed Apr 30, 2024
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  3. check_if_initiatlized to is_NOT_initialized 

    Change check_if_initiatlized to logical function to help with unit testing.
    @ekluzek
    ekluzek committed Apr 30, 2024
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  4. Fix so unit test will PASS

    @ekluzek
    ekluzek committed Apr 30, 2024
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Commits on May 1, 2024

  1. Spin off the option checker 

    Make the checking of options it's own subroutine to help with unit-testing.
    @ekluzek
    ekluzek committed May 1, 2024
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Commits on May 14, 2024

  1. update esmf build

    @jedwards4b
    jedwards4b committed May 14, 2024
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  2. fix pio path in github srt

    @jedwards4b
    jedwards4b committed May 14, 2024
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  3. working on srt

    @jedwards4b
    jedwards4b committed May 14, 2024
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  4. more workflow updates

    @jedwards4b
    jedwards4b committed May 14, 2024
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Commits on May 15, 2024

  1. work on ext build

    @jedwards4b
    jedwards4b committed May 15, 2024
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  2. case error correction

    @jedwards4b
    jedwards4b committed May 15, 2024
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  3. try this for cdeps build

    @jedwards4b
    jedwards4b committed May 15, 2024
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  4. more github workflow work

    @jedwards4b
    jedwards4b committed May 15, 2024
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  5. clean up compiler warnings

    @jedwards4b
    jedwards4b committed May 15, 2024
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Commits on May 16, 2024

  1. remove unused shr_sys_abort

    @jedwards4b
    jedwards4b committed May 16, 2024
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  2. fix cdeps cache issue

    @jedwards4b
    jedwards4b committed May 16, 2024
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  3. renames ww3dev to ww3

    @jedwards4b
    jedwards4b committed May 16, 2024
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  4. Merge pull request ESCOMP#456 from mvertens/feature/update_docn 

    Add ability to obtain multi level input from ocn and map and pass it back to cism
    @jedwards4b
    jedwards4b committed May 16, 2024
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Commits on May 17, 2024

  1. avoid integer overflow by skipping mediator in restart loop

    @jedwards4b
    jedwards4b committed May 17, 2024
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Commits on May 20, 2024

  1. changes for trigrid

    Mariana Vertenstein committed May 20, 2024
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Commits on May 22, 2024

  1. Merge pull request ESCOMP#457 from jedwards4b/ww3dev2ww3 

    renames ww3dev to ww3
    @jedwards4b
    jedwards4b committed May 22, 2024
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  2. Merge pull request ESCOMP#460 from jedwards4b/fix_mediator_restart 

    avoid integer overflow by skipping mediator in restart loop
    @jedwards4b
    jedwards4b committed May 22, 2024
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Commits on May 27, 2024

  1. move glc2ocn with glc2rof

    Mariana Vertenstein committed May 27, 2024
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Commits on May 29, 2024

  1. updates for cism2mosart coupling

    Mariana Vertenstein committed May 29, 2024
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Commits on May 30, 2024

  1. fixed ice discharge

    Mariana Vertenstein committed May 30, 2024
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Commits on May 31, 2024

  1. fixes for commit

    Mariana Vertenstein committed May 31, 2024
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  2. Merge remote-tracking branch 'origin/feature/cism2mosart' into featur… 

    …e/trigrid
    Mariana Vertenstein committed May 31, 2024
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  3. Add bilinr_nostd for wav2ice coupling

    @dabail10
    dabail10 committed May 31, 2024
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Commits on Jun 3, 2024

  1. bug fix

    Mariana Vertenstein committed Jun 3, 2024
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  2. more updates

    Mariana Vertenstein committed Jun 3, 2024
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Commits on Jun 4, 2024

  1. Merge branch 'main' of https://github.com/ESCOMP/CMEPS into cam7

    @brian-eaton
    brian-eaton committed Jun 4, 2024
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Commits on Jun 6, 2024

  1. Merge branch 'NOAA-EMC:emc/develop' into bugfix/aoflux4ufs

    @DeniseWorthen
    DeniseWorthen committed Jun 6, 2024
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Commits on Jun 7, 2024

  1. updates for cism->mosart->ocean routine

    Mariana Vertenstein committed Jun 7, 2024
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  2. more cleanup of mapping file specification

    Mariana Vertenstein committed Jun 7, 2024
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  3. Merge remote-tracking branch 'ESCOMP/main' into bugfix/aoflux4ufs

    @DeniseWorthen
    DeniseWorthen committed Jun 7, 2024
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Commits on Jun 9, 2024

  1. simply ufs fix for new aoflux variables

    @DeniseWorthen
    DeniseWorthen committed Jun 9, 2024
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Commits on Jun 10, 2024

  1. generalized lnd2rof mapping

    @mvertens
    mvertens committed Jun 10, 2024
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  2. updates to get f09_f09 working

    Mariana Vertenstein committed Jun 10, 2024
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Commits on Jun 12, 2024

  1. test github testing in cime PR #4631

    @jedwards4b
    jedwards4b committed Jun 12, 2024
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Commits on Jun 14, 2024

  1. more cleanup

    Mariana Vertenstein committed Jun 14, 2024
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Commits on Jun 16, 2024

  1. Merge branch 'feature/cism2mosart' into feature/trigrid

    @mvertens
    mvertens committed Jun 16, 2024
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  2. fixed compilation problems

    Mariana Vertenstein committed Jun 16, 2024
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Commits on Jun 18, 2024

  1. add simplification for how glc runoff is sent to mom/blom

    Mariana Vertenstein committed Jun 18, 2024
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  2. Merge pull request ESCOMP#464 from jedwards4b/test_cime_branch 

    test github testing in cime PR #4631
    @jedwards4b
    jedwards4b committed Jun 18, 2024
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  3. Revert "test github testing in cime PR #4631"

    @jedwards4b
    jedwards4b committed Jun 18, 2024
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  4. Merge pull request ESCOMP#468 from ESCOMP/revert-464-test_cime_branch 

    Revert "test github testing in cime PR #4631"
    @jedwards4b
    jedwards4b committed Jun 18, 2024
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  5. replace manage-externals with git-fleximod

    @jedwards4b
    jedwards4b committed Jun 18, 2024
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  6. Merge pull request ESCOMP#469 from jedwards4b/test_github_workflow 

    replace manage-externals with git-fleximod
    @jedwards4b
    jedwards4b committed Jun 18, 2024
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  7. Merge remote-tracking branch 'origin/main' into feature/cism2mosart

    @jedwards4b
    jedwards4b committed Jun 18, 2024
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  8. Merge branch 'feature/cism2mosart' into feature/trigrid

    @mvertens
    mvertens committed Jun 18, 2024
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Commits on Jun 19, 2024

  1. fix for merging in trigrid

    @mvertens
    mvertens committed Jun 19, 2024
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  2. Merge remote-tracking branch 'ESCOMP/main' into bugfix/aoflux4ufs

    @DeniseWorthen
    DeniseWorthen committed Jun 19, 2024
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Commits on Jun 20, 2024

  1. Merge pull request ESCOMP#462 from brian-eaton/cam7 

    Change CAM%DEV to CAM70 in buildnml
    @jedwards4b
    jedwards4b committed Jun 20, 2024
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Commits on Jun 21, 2024

  1. Remove negative runoff by downweighting positive runoff globally

    @billsacks
    billsacks committed Jun 21, 2024
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Commits on Jun 22, 2024

  1. Removing negative runoff: Create a dedicated FieldBundle for mods 

    Avoid modifying fields in place so that the ROF import fields are truly
what came from ROF. So this removal of negative runoff will just appear
in the fields mapped to OCN.
    @billsacks
    billsacks committed Jun 22, 2024
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  2. Add a namelist flag controlling the removal of negative runoff

    @billsacks
    billsacks committed Jun 22, 2024
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Commits on Jun 24, 2024

  1. Merge pull request ESCOMP#463 from mvertens/feature/cism2mosart 

    Implementation of glc->ocn coupling via going through mosart
    @jedwards4b
    jedwards4b committed Jun 24, 2024
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  2. this call is no longer needed and removing it fully removes the mct l… 

    …ibrary from cesm
    @jedwards4b
    jedwards4b committed Jun 24, 2024
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  3. Merge pull request ESCOMP#452 from DeniseWorthen/bugfix/aoflux4ufs 

    Fix aoflux for UFS
    @jedwards4b
    jedwards4b committed Jun 24, 2024
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  4. fix for UFS

    Mariana Vertenstein committed Jun 24, 2024
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  5. Merge remote-tracking branch 'origin/main' into remove_negative_runoff

    @billsacks
    billsacks committed Jun 24, 2024
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  6. Remove negative runoff from new glc runoff fields

    @billsacks
    billsacks committed Jun 24, 2024
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  7. Don't try to remove negative runoff on an absent field 

    I'm not sure if this is necessary, but it seems like it could be in some
configurations, and it won't hurt to do this check.
    @billsacks
    billsacks committed Jun 24, 2024
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Commits on Jun 25, 2024

  1. Merge pull request ESCOMP#472 from jedwards4b/remove_mct_init 

    this call is no longer needed and removing it fully removes the mct l…
    @jedwards4b
    jedwards4b committed Jun 25, 2024
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  2. updates for new fields from ocn

    Mariana Vertenstein committed Jun 25, 2024
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  3. fixes for problems found in UFS

    Mariana Vertenstein committed Jun 25, 2024
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  4. Merge tag 'cmeps0.14.70' into feature/trigrid 

    cmeps0.14.70
    Mariana Vertenstein committed Jun 25, 2024
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  5. fixed bug

    Mariana Vertenstein committed Jun 25, 2024
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Commits on Jun 26, 2024

  1. fixed bug

    Mariana Vertenstein committed Jun 26, 2024
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  2. Merge pull request ESCOMP#471 from billsacks/remove_negative_runoff 

    Remove negative runoff
    @jedwards4b
    jedwards4b committed Jun 26, 2024
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  3. Merge pull request ESCOMP#461 from dabail10/wavice 

    Add bilinr_nostd for wav2ice coupling
    @jedwards4b
    jedwards4b committed Jun 26, 2024
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  4. Merge pull request ESCOMP#429 from ekluzek/dust_emis_mod 

    Add shr_dust_emis_mod to handle options for dust emissions between CTSM and CAM
    @jedwards4b
    jedwards4b committed Jun 26, 2024
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  5. Merge pull request ESCOMP#470 from mvertens/feature/trigrid 

    Add trigrid capability - ability to run atm and lnd on separate grids
    @jedwards4b
    jedwards4b committed Jun 26, 2024
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  6. bug fix for wav2ocn_map

    @jedwards4b
    jedwards4b committed Jun 26, 2024
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Commits on Jun 27, 2024

  1. new fix for add_gusts

    @jedwards4b
    jedwards4b committed Jun 27, 2024
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Commits on Jun 28, 2024

  1. update share to use head of main in srt test

    @jedwards4b
    jedwards4b committed Jun 28, 2024
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  2. debug workflow

    @jedwards4b
    jedwards4b committed Jun 28, 2024
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Commits on Jul 1, 2024

  1. bug fix primarily for usf testing

    Mariana Vertenstein committed Jul 1, 2024
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  2. remove redundent use statement

    @jedwards4b
    jedwards4b committed Jul 1, 2024
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  3. removed duplicate references

    Mariana Vertenstein committed Jul 1, 2024
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  4. Merge pull request ESCOMP#474 from jedwards4b/add_gust_fix3 

    new fix for add_gusts
    @jedwards4b
    jedwards4b committed Jul 1, 2024
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  5. Merge branch 'main' into feature/bugfix

    @jedwards4b
    jedwards4b committed Jul 1, 2024
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  6. Merge pull request ESCOMP#477 from mvertens/feature/bugfix 

    bug fix primarily for usf testing
    @jedwards4b
    jedwards4b committed Jul 1, 2024
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