easypqp error

[jd690764]

• Describe the issue or question:
  I am testing spectral library generation but keep getting an error message:

Traceback (most recent call last):
File "C:\Users\PKJ\Desktop\msfragger2\FragPipe\fragpipe\lib..\tools\speclib\gen_con_spec_lib.py", line 212, in
easypqp = get_bin_path('easypqp', 'easypqp')
File "C:\Users\PKJ\Desktop\msfragger2\FragPipe\fragpipe\lib..\tools\speclib\gen_con_spec_lib.py", line 121, in get_bin_path
if dist.get('files') is None and sys.platform == "win32":
AttributeError: 'list' object has no attribute 'get'

Any help would be appreciated, Thank you,
Janos

• Upload your log file
  (If a log file hasn't been generated, go to the 'Run' tab in FragPipe, click 'Export Log', zip the resulting "log_[date_time].txt" file to avoid truncation, then attach the zipped file by drag & drop here.
  log_2021-09-30_18-26-24.txt
  )

[guoci]

This is a known issue (#421) and has been fixed, link to the fixed version below.
https://drive.google.com/drive/folders/1yLxJmXjN8tHpOos_eFRRfz4WjlMoAtV7?usp=sharing

[andrewyy677]

Hi guoci,

When I open the above link (https://drive.google.com/drive/folders/1yLxJmXjN8tHpOos_eFRRfz4WjlMoAtV7?usp=sharing), it shows "the dir is empty". Could you please confirm if the files are present or tell me how to fix the error? Thank you!

The error message:

python3 -u /metaEx/software/fragpipe/tools/speclib/gen_con_spec_lib.py 2023-06-05-decoys-protein_cycle2_humanswiss_contam_irt.fasta.fas ./ unused ./ True unused use_easypqp ciRT:noIM 40 '--max_delta_unimod 0.02 --max_delta_ppm 15.0 --fragment_types ['''b''','''y''',]' '--rt_lowess_fraction 0.01' non_delete_intermediate_files
easypqp
Traceback (most recent call last):
File "/metaEx/software/fragpipe/tools/speclib/gen_con_spec_lib.py", line 213, in
easypqp = get_bin_path('easypqp', 'easypqp')
File "/metaEx/software/fragpipe/tools/speclib/gen_con_spec_lib.py", line 122, in get_bin_path
if dist.get('files') is None and sys.platform == "win32":
AttributeError: '_PackageInfo' object has no attribute 'get'
Yingying

[fcyu]

That link contains a pre-released version. Since we have released a formal one, you should upgrade yours.

Best,

Fengchao