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python310Packages.intensity-normalization: 2.1.2 -> 2.1.4 #155759

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r-ryantm
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Automatic update generated by nixpkgs-update tools. This update was made based on information from passthru.updateScript.

meta.description for python310Packages.intensity-normalization is: "MRI intensity normalization tools"

meta.homepage for python310Packages.intensity-normalization is: "https://github.com/jcreinhold/intensity-normalization"

meta.changelog for python310Packages.intensity-normalization is: ""

Updates performed
  • Ran passthru.UpdateScript
To inspect upstream changes
Impact
Checks done (click to expand)
  • built on NixOS
  • The tests defined in passthru.tests, if any, passed
  • /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/.coregister-wrapped passed the binary check.
  • /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/fcm-normalize passed the binary check.
  • /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/plot-histograms passed the binary check.
  • /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/preprocess passed the binary check.
  • /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/nyul-normalize passed the binary check.
  • Warning: no invocation of /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/kde-normalize had a zero exit code or showed the expected version
  • /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/.fcm-normalize-wrapped passed the binary check.
  • Warning: no invocation of /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/.ravel-normalize-wrapped had a zero exit code or showed the expected version
  • /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/lsq-normalize passed the binary check.
  • /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/zscore-normalize passed the binary check.
  • /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/.nyul-normalize-wrapped passed the binary check.
  • Warning: no invocation of /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/ws-normalize had a zero exit code or showed the expected version
  • /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/.tissue-membership-wrapped passed the binary check.
  • /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/.preprocess-wrapped passed the binary check.
  • /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/tissue-membership passed the binary check.
  • /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/.zscore-normalize-wrapped passed the binary check.
  • Warning: no invocation of /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/.ws-normalize-wrapped had a zero exit code or showed the expected version
  • /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/.plot-histograms-wrapped passed the binary check.
  • Warning: no invocation of /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/.kde-normalize-wrapped had a zero exit code or showed the expected version
  • /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/.lsq-normalize-wrapped passed the binary check.
  • /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/coregister passed the binary check.
  • Warning: no invocation of /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin/ravel-normalize had a zero exit code or showed the expected version
  • 4 of 22 passed binary check by having a zero exit code.
  • 16 of 22 passed binary check by having the new version present in output.
  • found 2.1.4 with grep in /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4
  • found 2.1.4 in filename of file in /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4

Rebuild report (if merged into master) (click to expand)
6 total rebuild path(s)

3 package rebuild(s)

3 x86_64-linux rebuild(s)
3 x86_64-darwin rebuild(s)


First fifty rebuilds by attrpath
intensity-normalization
python310Packages.intensity-normalization
python39Packages.intensity-normalization
Instructions to test this update (click to expand)

Either download from Cachix:

nix-store -r /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4 \
  --option binary-caches 'https://cache.nixos.org/ https://nix-community.cachix.org/' \
  --option trusted-public-keys '
  nix-community.cachix.org-1:mB9FSh9qf2dCimDSUo8Zy7bkq5CX+/rkCWyvRCYg3Fs=
  cache.nixos.org-1:6NCHdD59X431o0gWypbMrAURkbJ16ZPMQFGspcDShjY=
  '

(The Cachix cache is only trusted for this store-path realization.)
For the Cachix download to work, your user must be in the trusted-users list or you can use sudo since root is effectively trusted.

Or, build yourself:

nix-build -A python310Packages.intensity-normalization https://github.com/r-ryantm/nixpkgs/archive/9326d408cb3b8fcbe7fe67e3fe1a874fe05e5e3e.tar.gz

After you've downloaded or built it, look at the files and if there are any, run the binaries:

ls -la /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4
ls -la /nix/store/l541b5qxagnp1pfsg6b6qnp1cj4jjwdc-python3.10-intensity-normalization-2.1.4/bin


Pre-merge build results

We have automatically built all packages that will get rebuilt due to
this change.

This gives evidence on whether the upgrade will break dependent packages.
Note sometimes packages show up as failed to build independent of the
change, simply because they are already broken on the target branch.

Result of nixpkgs-review run on x86_64-linux 1

2 packages built:
  • intensity-normalization (python39Packages.intensity-normalization)
  • python310Packages.intensity-normalization

Maintainer pings

cc @bcdarwin for testing.

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@fabaff fabaff left a comment

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Change looks good to me.

@fabaff fabaff merged commit f42128b into NixOS:master Jan 24, 2022
@r-ryantm r-ryantm deleted the auto-update/python310Packages.intensity-normalization branch January 24, 2022 11:04
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2 participants