picard-tools: 2.18.17 -> 2.18.20

[r-ryantm]

Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/picard-tools/versions.

meta.description for picard-tools is: '"Tools for high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF"'.

Checks done (click to expand)

• built on NixOS
• Warning: no invocation of /nix/store/kcc5ndn91n33p4xw31i7wywxva301030-picard-tools-2.18.20/bin/picard had a zero exit code or showed the expected version
• 0 of 1 passed binary check by having a zero exit code.
• 0 of 1 passed binary check by having the new version present in output.
• found 2.18.20 with grep in /nix/store/kcc5ndn91n33p4xw31i7wywxva301030-picard-tools-2.18.20
• directory tree listing: https://gist.github.com/e6329e6bc584f35a55146740ce39bf9a
• du listing: https://gist.github.com/22540dd9224ac22886d7b1d59f76b74c

Rebuild report (if merged into master) (click to expand)

4 total rebuild path(s)

1 package rebuild(s)

1 x86_64-linux rebuild(s)
1 i686-linux rebuild(s)
1 x86_64-darwin rebuild(s)
1 aarch64-linux rebuild(s)

First fifty rebuilds by attrpath
picard-tools

Instructions to test this update (click to expand)

Either download from Cachix:

nix-store -r /nix/store/kcc5ndn91n33p4xw31i7wywxva301030-picard-tools-2.18.20 \
  --option binary-caches 'https://cache.nixos.org/ https://r-ryantm.cachix.org/' \
  --option trusted-public-keys '
  r-ryantm.cachix.org-1:gkUbLkouDAyvBdpBX0JOdIiD2/DP1ldF3Z3Y6Gqcc4c=
  cache.nixos.org-1:6NCHdD59X431o0gWypbMrAURkbJ16ZPMQFGspcDShjY=
  '

(r-ryantm's Cachix cache is only trusted for this store-path realization.)

Or, build yourself:

nix-build -A picard-tools https://github.com/r-ryantm/nixpkgs/archive/b261fb0474951e14b815f36e535d5ea6036d47c9.tar.gz

After you've downloaded or built it, look at the files and if there are any, run the binaries:

ls -la /nix/store/kcc5ndn91n33p4xw31i7wywxva301030-picard-tools-2.18.20
ls -la /nix/store/kcc5ndn91n33p4xw31i7wywxva301030-picard-tools-2.18.20/bin

cc @jbedo for testing.