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R: Update CRAN and bioconductor packages #75010

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@jabranham jabranham commented Dec 5, 2019

Motivation for this change

Update R package sets

Things done
  • Tested using sandboxing (nix.useSandbox on NixOS, or option sandbox in nix.conf on non-NixOS linux)
  • Built on platform(s)
    • NixOS
    • macOS
    • other Linux distributions
  • Tested via one or more NixOS test(s) if existing and applicable for the change (look inside nixos/tests)
  • Tested compilation of all pkgs that depend on this change using nix-shell -p nix-review --run "nix-review wip"
  • Tested execution of all binary files (usually in ./result/bin/)
  • Determined the impact on package closure size (by running nix path-info -S before and after)
  • Ensured that relevant documentation is up to date
  • Fits CONTRIBUTING.md.

ran nix-build test-evaluation.nix --dry-run

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cc @peti

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@peti peti commented Dec 6, 2019

Test builds are running at https://hydra.nixos.org/jobset/nixpkgs/r-updates. If those come out fine, then we can merge.

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@jabranham jabranham commented Dec 10, 2019

Looks like the build finished OK

peti added a commit to peti/nixpkgs that referenced this pull request Dec 13, 2019
@peti peti self-assigned this Dec 13, 2019
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@peti peti commented Dec 13, 2019

I've cherry-picked the R update from #75587 into r-updates, too. I'll merge later tonight, assuming that Hydra reveals no major disaster.

@peti peti closed this in b9a558a Dec 16, 2019
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