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Cdm v6 #218

Merged
merged 58 commits into from
Oct 11, 2018
Merged

Cdm v6 #218

merged 58 commits into from
Oct 11, 2018

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clairblacketer
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This version address the following issues/pull requests:

CDM

  • #81 Adds the COST table
  • #137 Adds the SURVEY_CONDUCT table
  • #181 Adds the LOCATION_HISTORY table
  • #91 Latitude and longitude added to LOCATION table
  • #107 Contract owner information added to PAYER_PLAN_PERIOD
  • #120 New fields added to PAYER_PLAN_PERIOD (PAYER_CONCEPT_ID, PLAN_CONCEPT_ID)
  • #166 Record inserted into METADATA to document CDM version
  • #172 NOTE_EVENT_ID and NOTE_DOMAIN_ID (NOTE_EVENT_TABLE_CONCEPT_ID) added to NOTE
  • #198 Change IDs to BIGINT
  • #153 ADMISSION_SOURCE_CONCEPT_ID changed to ADMITTED_FROM_CONCEPT_ID
  • #214 All CONCEPT_IDs are mandatory except for UNIT_CONCEPT_ID, VALUE_AS_CONCEPT_ID, and OPERATOR_CONCEPT_ID
  • #164 Any reference to DOMAIN_ID was switched to EVENT_FIELD_CONCEPT_ID
  • #212 CDM Results schema created with tables COHORT and COHORT_DEFINITION
  • #210 DEATH table removed and cause of death now stored in CONDITION_OCCURRENCE
  • #166 Record inserted into METADATA identifying the CDM version
  • #172 Added NOTE_EVENT_ID and EVENT_FIELD_CONCEPT_ID to NOTE table

Vocabulary

  • #186 Keep deprecated CPT concepts active and standard
  • #85 NOTE_NLP concepts added

Wiki

  • #188 Added foreign key description to wiki files
  • All THEMIS rules added to wiki

Additional Updates

  • DATE fields are now optional and DATETIME fields are mandatory

clairblacketer and others added 30 commits August 30, 2018 21:00
@clairblacketer clairblacketer merged commit b69d6fd into master Oct 11, 2018
@clairblacketer clairblacketer deleted the cdm_v6 branch October 11, 2018 13:35
@juh7007
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juh7007 commented Oct 19, 2018

#210 DEATH table removed and cause of death now stored in CONDITION_OCCURRENCE

Hi, @clairblacketer...

I thought the death date will be added into the PERSON table as below... But I don't see this change made for CDM V6. Is this change coming soon? Thanks!

*** A singular death date should be chosen by the ETL and stored in the PERSON table.

Field Required Type Description
death_datetime No datetime The date and time the person was deceased. If the precise date including day or month is not known or not allowed, December is used as the default month, the last day of the month the default day, and midnight as the default time.

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2 participants