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Michael Kallfelz edited this page Aug 31, 2021 · 4 revisions

ICD10

ICD10 (often spelled "ICD-10") is a coding system developed by the WHO for the purpose of disease and mortality reporting.

Note: In some countries, ICD10 is extended by local codes. For example, in the US a derivative system called ICD10CM is in use, in Germany a similar one, ICD10GM. Even though many of the codes are shared, those country-specific coding systems are separate and distinct vocabularies in their own right in the OMOP Standardized Vocabularies.

The last version provided by WHO is from 2019. As the main focus of WHO is now on ICD11 it is likely that there will be no more main releases but only additions to the existing version. However, most derived versions are updated yearly.

Sources

Transformation

The procedures for transforming Concepts from the source to the OMOP Standard Vocabularies can be found on the OHDSI GitHub.

Concept Names

All Concepts are assigned the longest of all available names.

Concept Code

All ICD10 codes are represented in the format containing the dot.

Standard Concepts

All ICD10 codes are non-Standard which means that they are mapped to the respective Standard concepts defined by the vocabulary team. Technically, they have single (1-to-1) or several (1-to-many) "Maps to" relationships in the concept_relationship_table.

Domains

For each ICD10 Concept, the Domain is inferred from the SNOMED Concept it is mapped to. If a ICD10 Source Concept is mapped to more than one target SNOMED Concept, a combination Domain is assigned. If a ICD10 Concept has no mappings the Domain is inferred from its neighboring codes.

Domain Notes
Condition
Measurement
Observation
Procedure

Concept Classes

ICD10 has two Concept Classes: "ICD10 code" and "ICD10 Hierarchy". "ICD10 Hierarchy" Concepts are all highest level 3-character codes. All codes which are subclassifications of them and contain a dot in the code are Concept Class "ICD10 code".

Concept Relationships

There are only mapping relationships defined for ICD10.

ICD10 to SNOMED map

ICD10 concepts are non-Standard Concepts and therefore are mapped to Standard Concepts through records in the CONCEPT_RELATIONSHIP table. All such mappings point to SNOMED-based concepts. Most of these SNOMED Concepts are in the Condition Domain, but despite the fact that ICD10 is a "Classification of Disease" some of them get mapped to Procedure, Measurement and Observation Domain Concepts. All mappings are manually maintained by a team of curators.

Most mappings establish one-to-one equivalence between the Concepts. However, some ICD10 Concepts are pre-coordinated (consist of several semantic components), contain negations, declarations about conditions at an unspecified time in the past (e.g. medical history of), declarations about people other than the patient (e.g. family history), lab test findings, mixed mother/child conditions or Observations. All these cases are properly handled as described in the Mapping description.

Hierarchy

ICD10 Concepts are non-Standard Concepts and therefore do not participate in the hierarchy of the CONCEPT_ANCESTOR table.

Instructions for ETL

All ICD10 concepts are non-Standard. That means they have to be mapped to the corresponding Standard Concepts using the CONCEPT_RELATIONSHIP table ("Maps to" and occasionally "Maps to value" records). Most of them are mapped to single Condition Concepts, generating one-to-one records in the CONDITION_OCCURRENCE table, but some of them create multiple records or mappings to other domains.

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