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v2.10.0

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@markwoon markwoon released this 25 Mar 21:26
· 187 commits to development since this release

2.10.0 (2024-3-25)

Features

  • data: update to CPIC v1.38 and latest PharmVar (560bdb8)
  • pharmcat: report RYR1 using lowest-function gene algorithm (596058a)
  • preprocessor: an option to not perform a gVCF check (209f68f), closes #174

Bug Fixes

  • data: update data (984c73a)
  • namedallelematcher: update DPYD HapB3 support for HapB3 intronic allele (b32b4ae)
  • preprocessor: improve message for gVCF (2d4da7d), closes #174
  • reporter: add check for multiple conflicting phenotype/activity values (b9b1cd1)
  • reporter: fix edge-case for outside calls of AS genes that only specify phenotype and not score (1321518)
  • reporter: fix genotype display when no genotype is provided in outside call (1be5c6d)
  • reporter: fix missing phenotype and activity score in drug section of HTML report (e3f1029)
  • reporter: standardize naming (29e3900)

Performance Improvements

  • diplotype-comparator: reduce runtime (d17ca4a)

Reverts

  • revert message annotation update (6cf0e3b)