The Planteome Project
- Corvallis, OR, USA
- http://www.planteome.org/
Pinned repositories
Repositories
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plant-trait-ontology
Explore the Plant Trait Ontology on the Planteome site.
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CO_350-oat-traits
Oat trait dictionary developed by Crop Ontology, Oat Global, T3 and PepsiCO
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plant-experimental-conditions-ontology
Repository for the Plant Experimental Conditions Ontology
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go-site-xrefs-fork
Forked from geneontology/go-siteUse this to add xrefs to metadata/db-xrefs.yaml and submit a pull request. Then they will be in the global xref file that AmiGO2 uses. Before making any changes, you need to update the fork to be consistent with the GO version. Use "git fetch upstream, git merge upstream/master, git push.
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CO_325-banana-traits
Banana Trait Ontology maintained by Crop Ontology and Musabase
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CO_331-sweetpotato-traits
Sweetpotato Trait Ontology maintained by Crop Ontology and sweetpotatobase
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plant-ontology
Repository for the Plant Ontology
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CO_334-cassava-traits
Cassava Trait Ontology maintained by Crop Ontology and Cassavabase
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planteome-data-visualization
Repository for the Data and Visualization working group
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amigo
Forked from geneontology/amigoThis repo is the Planteome fork of geneontology.org AmiGO2 project. Issues in this repo should be reported only on AmiGO issues. Issues can be pushed upstream if relevant for GO.
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planteome-core
Repository (and tracker) for a planteome.owl importer for the whole project
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planteome-annotation-data
This is a place to discuss issues around the Planteome annotation data and store useful scripts etc.
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plant-stress-ontology
An ontology containing biotic and abiotic plant stresses. Part of the Planteome suite of reference ontologies. Formerly called the Ontology of Plant Stress
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curate_site
Drupal site for curate.planteome.org
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RTB-Ontology-Release-Tools
Tools and guidelines for creating releases for RTB ontologies.
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samara
extracts plant trait data from open data sources like apsnet and ars-grin
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planteome-analyses
This is a place to store folders of results, and notes on analyses performed using the Planteome ontologies. Please collect the documents in a folder with an explicit name and date (e.g. fall-2015)
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planteome-inca-form
Configuration for the Planteome INCA