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Add and modify calls for generateTransportData() #167

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merged 2 commits into from
Dec 12, 2013

Commits on Dec 12, 2013

  1. Add and modify calls for generateTransportData()

    - move call for seed species from initialize() to
    addSeedMechanismToCore()
    - call getTransportData() for reactions found in reaction libraries in
    addReactionLibraryToEdge()
    bbuesser committed Dec 12, 2013
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  2. Add function updateLonePairs() and call in fromRDKitMol()

    - setting the number of lone electron pairs
    - also fixes fromSMILES and similar functions using fromRDKitMol()
    bbuesser committed Dec 12, 2013
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