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amdirt v1.7.0

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@alexhbnr alexhbnr released this 15 Dec 14:44
· 11 commits to master since this release

New features:

  • download the dates table via amdirt download
  • obtain dates for a subset of samples via amdirt convert
  • add option to use a local AMDir installation to look up schemas instead of the slower look up from the GitHub servers and avoid IP blocking
  • add option to download the table from ENA that is used for amdirt autofill when autofilling the library information

Bugfixes:

  • actually use of the parameter --output in amdirt download
  • infer required BibTex entries based on the library instead of the sample table
  • pin version of Python module streamlit-aggrid to allow filtering on text columns
  • improved parsing of the error messages
  • fix choosing the colour chemistry of unknown sequencers when exporting nf-core/eager tables

Full Changelog: 1.6.5...1.7.0