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Mcir cil #204

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6 changes: 6 additions & 0 deletions notebooks/MR/README.md
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Expand Up @@ -19,6 +19,12 @@ Jupyter notebooks for the MR exercises. Recommended order:

3. [f_create_undersampled_kspace](f_create_undersampled_kspace.ipynb) demonstrates a retrospective data under-sampling.

## Advanced topics

1. [g_non_cartesian_reconstruction](g_non_cartesian_reconstruction.ipynb) shows how to using optimisation approaches from CIL to reconstruct a 3D non-Cartesian dataset acquired with a Golden radial phase encoding trajectory.

2. [h_mr_mcir_grpe](h_mr_mcir_grpe.ipynb) gives an overview of all necessary steps for a motion corrected MR image reconstruction: obtaingin a motion surrogate to identify which k-space point was acquired in which motion state, reconstructing motion resolved images, estimating non-rigid motion fields describing the spatial transformation between the different motion states and finally utilising these motion fields and motion surrogates to carry out a motion corrected image reconstruction.


## Feel free to ignore

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547 changes: 547 additions & 0 deletions notebooks/MR/g_non_cartesian_reconstruction.ipynb

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