Skip to content

STRhub v1.0.0

Latest

Choose a tag to compare

@Tfronta Tfronta released this 18 Sep 13:45
· 100 commits to main since this release

First citable release of STRhub, the open-access web platform for forensic short tandem repeat (STR) genetics deployed at https://strhub.app.

What this release contains

  • STR marker catalogue: 228 markers (CODIS core, other autosomal, X-STRs and Y-STRs) with GRCh38/GRCh37 coordinates, repeat motifs, ISFG/STRNaming sequence structures and MPS kit coverage from STRidER's FSSG v6.1.
  • Allele frequencies: population allele frequencies and summary statistics from capillary electrophoresis (pop.STR / SP-SMART) and sequencing (1000 Genomes Project) datasets, in charts and downloadable tables.
  • Tools: DNA mixture simulator contrasting CE and NGS, STR motif explorer over the ISFG minimum range, FASTA generator with configurable flanking regions, embedded IGV.js viewer with 1000 Genomes demo reads.
  • Foundations: educational articles in English, Spanish and Portuguese.
  • STRhub Verified (tester phase): reproducible verification reports for STR analysis tools.

STRhub is not a casework tool and does not replace validated forensic software.

Citation

Frontanilla Recalde, T. S. (2026). STRhub: Central Hub for Short Tandem Repeats (v1.0.0) [Software]. https://strhub.app. Archived on Zenodo; the DOI is listed in CITATION.cff once minted.

Software licence: GNU AGPL-3.0-only. Data compilations on the platform: CC BY 4.0, with the source datasets cited on each page.