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TheHumphreysLab

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  1. plot1cell plot1cell Public

    Forked from HaojiaWu/plot1cell

    R 95 18

  2. Mouse_DKD_Rx_Atlas Mouse_DKD_Rx_Atlas Public

    R 16 5

  3. MALDIpy MALDIpy Public

    MALDIpy: a Python package for single-cell analysis of imaging mass spectrometry data (Cell Metabolism 2024)

    Jupyter Notebook 7

  4. sci-RNA-seq-kidney sci-RNA-seq-kidney Public

    Scripts used in the project of profiling mouse kidney fibrogenesis with sci-RNA-seq3 (Cell Metabolism 2022)

    Jupyter Notebook 6

  5. CellScopes.jl CellScopes.jl Public

    Forked from HaojiaWu/CellScopes.jl

    A Julia package for single cell and spatial data analysis

    Julia 5 1

  6. SHARE-seq-kidney SHARE-seq-kidney Public

    Scripts generating data for our study of human kidney anatomical regions with SHARE-seq and imaging mass spectrometry (Cell Metabolism 2024)

    Jupyter Notebook 3

Repositories

Showing 10 of 12 repositories
  • CellScopes.jl Public Forked from HaojiaWu/CellScopes.jl

    A Julia package for single cell and spatial data analysis

    TheHumphreysLab/CellScopes.jl’s past year of commit activity
    Julia 5 MIT 2 0 0 Updated Sep 4, 2024
  • kidney_anatomy_chromatin Public

    Scripts used in our study of chromatin interaction and modification profiling across human kidney anatomic regions (Scientific Data 2024)

    TheHumphreysLab/kidney_anatomy_chromatin’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Jul 28, 2024
  • Human_DKD_Visium Public Forked from BuilderPie/Human_DKD_Visium
    TheHumphreysLab/Human_DKD_Visium’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Jun 27, 2024
  • MALDIpy Public

    MALDIpy: a Python package for single-cell analysis of imaging mass spectrometry data (Cell Metabolism 2024)

    TheHumphreysLab/MALDIpy’s past year of commit activity
    Jupyter Notebook 7 0 0 0 Updated Jun 12, 2024
  • SHARE-seq-kidney Public

    Scripts generating data for our study of human kidney anatomical regions with SHARE-seq and imaging mass spectrometry (Cell Metabolism 2024)

    TheHumphreysLab/SHARE-seq-kidney’s past year of commit activity
    Jupyter Notebook 3 0 1 0 Updated Jun 3, 2024
  • sci-RNA-seq-kidney Public

    Scripts used in the project of profiling mouse kidney fibrogenesis with sci-RNA-seq3 (Cell Metabolism 2022)

    TheHumphreysLab/sci-RNA-seq-kidney’s past year of commit activity
    Jupyter Notebook 6 0 1 0 Updated Jun 3, 2024
  • Mouse_IRI_snATAC Public

    Single nucleus epigenetic atlas for mouse kidneys with ischemia-reperfusion injury

    TheHumphreysLab/Mouse_IRI_snATAC’s past year of commit activity
    Shell 0 0 0 0 Updated May 27, 2024
  • 14days_and_more Public Forked from HaojiaWu/14days_and_more
    TheHumphreysLab/14days_and_more’s past year of commit activity
    Python 0 1 0 0 Updated Mar 16, 2024
  • plot1cell Public Forked from HaojiaWu/plot1cell
    TheHumphreysLab/plot1cell’s past year of commit activity
    R 95 MIT 26 0 0 Updated Nov 7, 2023
  • Spatial_analysis Public
    TheHumphreysLab/Spatial_analysis’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Sep 10, 2023
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