TrinityCTAT
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ctat-mutations
ctat-mutations PublicMutation detection using GATK4 best practices and latest RNA editing filters resources. Works with both Hg38 and Hg19
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CTAT-LR-fusion
CTAT-LR-fusion Publicfusion transcript detection using long reads, leveraging ctat-minimap2 and FusionInspector
Perl 13
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ctat-genome-lib-builder
ctat-genome-lib-builder PublicSoftware used by Trinity CTAT for building CTAT Genome Libs, resource databases shared by Trinity CTAT components
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Repositories
- CTAT-LR-fusion Public
fusion transcript detection using long reads, leveraging ctat-minimap2 and FusionInspector
TrinityCTAT/CTAT-LR-fusion’s past year of commit activity - ctat-mutations Public
Mutation detection using GATK4 best practices and latest RNA editing filters resources. Works with both Hg38 and Hg19
TrinityCTAT/ctat-mutations’s past year of commit activity - CTAT_VIF_Paper Public
TrinityCTAT/CTAT_VIF_Paper’s past year of commit activity - CTAT-VirusIntegrationFinder Public
TrinityCTAT/CTAT-VirusIntegrationFinder’s past year of commit activity - ctat-genome-lib-builder Public
Software used by Trinity CTAT for building CTAT Genome Libs, resource databases shared by Trinity CTAT components
TrinityCTAT/ctat-genome-lib-builder’s past year of commit activity - Trinity_CTAT Public
TrinityCTAT/Trinity_CTAT’s past year of commit activity - ctat-minimap2 Public Forked from lh3/minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
TrinityCTAT/ctat-minimap2’s past year of commit activity - rnaseqc Public Forked from getzlab/rnaseqc
Fast, efficient RNA-Seq metrics for quality control and process optimization
TrinityCTAT/rnaseqc’s past year of commit activity
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