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Linked-seq
Linked-seq PublicThe gRNA design and data analysis codes of the Linked sequencing (Linked-seq) project.
Python
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COMSV
COMSV PublicForked from kevingroup/COMSV
COMSV (Cancer Optical Mapping based Structural Variation detection) is a pipeline for SV detection based on nanochannel optical mapping data.
C++
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SAKURA
SAKURA PublicForked from hahaschool/SAKURA
SAKURA/桜(sakura)/🌸 : Single-cell data Analysis with Knowledge inputs from User using Regularized Autoencoders
Python
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aspire
aspire PublicForked from kevingroup/aspire
ASPIRE (ASsembly Pipeline with Iterative REfinement) is a pipeline for constructing virus-sized genomes out of NGS reads (short reads).
Perl
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Repositories
- SAKURA Public Forked from hahaschool/SAKURA
SAKURA/桜(sakura)/🌸 : Single-cell data Analysis with Knowledge inputs from User using Regularized Autoencoders
Yip-Lab/SAKURA’s past year of commit activity - SHARP Public
SHARP: Overcoming artificial structures in resolution-enhanced Hi-C data by signal decomposition and multi-scale attention.
Yip-Lab/SHARP’s past year of commit activity - Linked-seq Public
The gRNA design and data analysis codes of the Linked sequencing (Linked-seq) project.
Yip-Lab/Linked-seq’s past year of commit activity - COMSV Public Forked from kevingroup/COMSV
COMSV (Cancer Optical Mapping based Structural Variation detection) is a pipeline for SV detection based on nanochannel optical mapping data.
Yip-Lab/COMSV’s past year of commit activity - psirc Public Forked from Christina-hshi/psirc
Full-length linear and circular transcript isoform reconstruction and quantification
Yip-Lab/psirc’s past year of commit activity - aspire Public Forked from kevingroup/aspire
ASPIRE (ASsembly Pipeline with Iterative REfinement) is a pipeline for constructing virus-sized genomes out of NGS reads (short reads).
Yip-Lab/aspire’s past year of commit activity - SH-assembly Public Forked from Christina-hshi/SH-assembly
K-mer counting with low memory consumption enables de novo assembly of 106x human sequence data in 2.7 hours
Yip-Lab/SH-assembly’s past year of commit activity - CQF-deNoise Public Forked from Christina-hshi/CQF-deNoise
CQF-deNoise enables fast k-mer counting with memory usage nearly unaffected by sequencing errors.
Yip-Lab/CQF-deNoise’s past year of commit activity
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