Add option to change scale factor for cell segmentation #434
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ngreenwald
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Jul 27, 2021
Co-authored-by: Noah F. Greenwald <noahfgreenwald@gmail.com>
ngreenwald
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Jul 27, 2021
y2kbugger
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Jul 29, 2021
* Add cell in Segment_Image_Data to change scale factor for Mesmer segmentation * Update description of rescale_factor Co-authored-by: Noah F. Greenwald <noahfgreenwald@gmail.com> Co-authored-by: Noah F. Greenwald <noahfgreenwald@gmail.com>
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What is the purpose of this PR?
Closes #423.
Segment_Image_Data.ipynbdoes not make it obvious that the image scaling factor can be adjusted. We add an option to allow the user to easily override the default value of 1.0.How did you implement your changes
Add a cell before the call to
create_deepcell_outputto allow the user to set thescaleargument.