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Alexey Shiklomanov ashiklom

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pecan
Forked from PecanProject/pecan

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

R 1
ED2
Forked from EDmodel/ED2

Ecosystem Demography Model

Fortran 2

1,268 contributions in the last year

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First pull request First issue First repository Joined GitHub

November 2018

ashiklom/helpecan Nov 8
ashiklom/fortebaseline R Nov 16

Created a pull request in PecanProject/pecan that received 5 comments

Nov 7

PEcAn Docker API

Description First pass at a PEcAn Docker API, via a new pecanapi package. Highlighted features are: Modify docker/receiver.py to accept a pecan_json

+2,144 −7 • 5 comments

Workflow pkg should depend data.atmosphere Nov 5
DOCKER: New development workflow using RabbitMQ Nov 5
ED2: Pass arbitrary binary arguments Nov 6
API bugfix: Pass entire PEcAn XML as string Nov 9
ED2: Minor revisions and additions Nov 14

fix dependencies list Nov 5
docker.sh would continue even in case of failure Nov 5
Rabbitmq portainer hostname Nov 6
Quick fix for gSSURGO soil extraction function Nov 7
API bugfix: Pass entire PEcAn XML as string Nov 9
Update to MAAT model wrappers Nov 12
make sure to exit the script in case of an error Nov 16

Created an issue in FoRTExperiment/FoRTE-mgmt that received 5 comments

Nov 12

FoRTE team meeting 2018-11-12

First modeling paper -- establishing the baseline Research questions Boring: Can models reproduce observed forest growth following stand-replacin…

5 comments

Update to new `rlang` syntax Nov 2
Run ED only with user-selected PFTs Nov 5
PEcAn workflow fails if missing ensemble tag Nov 7
PEcAn API package fails with duplicate tag names Nov 9

Hydra for common clocking tasks Nov 7

XKCD code quality Nov 8

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