Malaria Detection #927

ayush-raj8 · 2021-04-18T16:07:51Z

Description

Python script and model to detect malaria infected cells.

Fixes #893

Replace 893 with the issue number which is fixed in this PR 927

Have you read the Contributing Guidelines on Pull Requests?

Yes

Type of change

New feature (non-breaking change which adds functionality)

Checklist:

My code follows the style guidelines(Clean Code) of this project
I have performed a self-review of my own code
I have commented my code, particularly in hard-to-understand areas
I have created a helpful and easy to understand README.md
My documentation follows Template for README.md
My changes generate no new warnings

kaustubhgupta · 2021-04-19T04:21:34Z

Malaria/Dataset/Dataset Link.txt

@@ -0,0 +1,7 @@
+


this file is not needed , you can delete it

kaustubhgupta · 2021-04-19T04:24:40Z

Malaria/main.py

+os.environ['TF_XLA_FLAGS'] = '--tf_xla_enable_xla_devices'
+
+# reading image
+img = Image.open("Images/cell1.jpg")


Take input for image path from user

Malaria/main.py

kaustubhgupta · 2021-04-19T04:26:36Z

Malaria/Model development/malariadetection.ipynb

@@ -0,0 +1,450 @@
+{


Convert this notebook into .py script and delete this notebook

Co-authored-by: Kaustubh Gupta <kaustubhgupta1828@gmail.com>

kaustubhgupta

Delete the malaraidetection.ipynb file along with this change:

kaustubhgupta · 2021-04-20T06:01:57Z

Malaria/script.py

@@ -0,0 +1,86 @@
+# importing the libraries for loading data and visualisation


name this file as model_training.py instead of script.py

kaustubhgupta

For the third time: DELETE THIS FILE! malariadetection.ipynb

Malaria/main.py

Co-authored-by: Kaustubh Gupta <kaustubhgupta1828@gmail.com>

ayush-raj8 · 2021-04-21T06:23:37Z

@kaustubhgupta This new deep source python is showing errors because of comments and line too long. This code runs perfectly fine on any python ide e.g. Pycharm.
Line too long cannot be removed as it involves model formation.

Lines will have more than 88 characters , because this is the standard way of training , testing and forming CNN.

Kushal997-das

LGTM 👍

antrikshmisri · 2021-04-23T08:00:33Z

@kaustubhgupta This new deep source python is showing errors because of comments and line too long. This code runs perfectly fine on any python ide e.g. Pycharm.
Line too long cannot be removed as it involves model formation.

Lines will have more than 88 characters , because this is the standard way of training , testing and forming CNN.

@ayush-raj8 Have a look at pep8 guidelines for long lines here. Also there are great online pep8 formatters.

avinashkranjan

LGTM

Malaria Detection

996fa25

kaustubhgupta suggested changes Apr 19, 2021

View reviewed changes

kaustubhgupta added the bug Something isn't working label Apr 19, 2021

ayush-raj8 and others added 11 commits April 19, 2021 10:29

Update Malaria/main.py

99f4dba

Co-authored-by: Kaustubh Gupta <kaustubhgupta1828@gmail.com>

Delete Malaria/Dataset directory

2a372b9

Add files via upload

ddf2505

Update script.py

6d5a692

Update script.py

eb7c066

Update script.py

a6c66a0

Update script.py

e48548b

Delete script.py

8ab1ce8

Add files via upload

e7a3b88

Update requirements.txt

d31e5eb

Taking Path input from user

3249833

kaustubhgupta suggested changes Apr 20, 2021

View reviewed changes

Name change to model_training.py

10716b9

kaustubhgupta suggested changes Apr 21, 2021

View reviewed changes

Malaria/main.py Outdated Show resolved Hide resolved

ayush-raj8 and others added 5 commits April 21, 2021 11:36

Update Malaria/main.py

68f0a2a

Co-authored-by: Kaustubh Gupta <kaustubhgupta1828@gmail.com>

Delete Malaria/Model development directory

92b6e6a

Update main.py

6870abf

Update main.py

63adf6a

Update model_training.py

faca863

kaustubhgupta approved these changes Apr 22, 2021

View reviewed changes

kaustubhgupta added next review needed Approved by some mentors, more approvals needed and removed bug Something isn't working labels Apr 22, 2021

kaustubhgupta requested review from antrikshmisri and santushtisharma10 April 22, 2021 05:28

Kushal997-das approved these changes Apr 22, 2021

View reviewed changes

santushtisharma10 approved these changes Apr 23, 2021

View reviewed changes

Update model_training.py

569c0e7

kaustubhgupta requested review from antrikshmisri and removed request for antrikshmisri April 26, 2021 05:17

antrikshmisri approved these changes Apr 26, 2021

View reviewed changes

kaustubhgupta added Approved PR Approved and Ready to Merge gssoc23 Issues created for/by the GirlScript Summer of Code'23 Participants level3 New features, Major bug fixing and removed next review needed Approved by some mentors, more approvals needed labels Apr 26, 2021

avinashkranjan approved these changes Apr 26, 2021

View reviewed changes

avinashkranjan merged commit b1f219d into avinashkranjan:master Apr 26, 2021

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Malaria Detection #927

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		@@ -0,0 +1,86 @@
		# importing the libraries for loading data and visualisation

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ayush-raj8 commented Apr 18, 2021 • edited Loading Uh oh! There was an error while loading. Please reload this page.

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Description

Fixes #893

Have you read the Contributing Guidelines on Pull Requests?

Type of change

Checklist:

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ayush-raj8 commented Apr 18, 2021 •

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