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Add notebook links to family table in "Getting Started" page #774

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merged 1 commit into from
Feb 4, 2024

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GStechschulte
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@GStechschulte GStechschulte commented Feb 4, 2024

Resolves #755

Sometimes there are multiple notebooks for one family. Currently, I just link one of the notebooks. For families where no notebook exists, the column value is To be added.

I went through each notebook and linked the corresponding notebook and or section, but it is possible some families are sneaking by. @canyon289 or @tomicapretto if you think anything is missing off the top of your head let me know.

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codecov-commenter commented Feb 4, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Comparison is base (9a1387a) 89.86% compared to head (0df1ec7) 89.86%.

Additional details and impacted files
@@           Coverage Diff           @@
##             main     #774   +/-   ##
=======================================
  Coverage   89.86%   89.86%           
=======================================
  Files          46       46           
  Lines        3810     3810           
=======================================
  Hits         3424     3424           
  Misses        386      386           

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Amazing! Thanks!

@tomicapretto tomicapretto merged commit b5b9f09 into bambinos:main Feb 4, 2024
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GStechschulte added a commit to GStechschulte/bambi that referenced this pull request Feb 5, 2024
GStechschulte added a commit that referenced this pull request Mar 29, 2024
* use bayeux to access a wide range of samplers

* use bayeux to access a wide range of samplers

* add notebook links to family table (#774)

* access methods programatically

* clean bayeux idata to be consistent with pymc model coords

* rename alternative sampler args in tests

* change docstring to reflect bayeux sampler names

* bayeux dependencies are numpyro/jax/jaxlib/blackjax

* rename idata coords and dims to PyMC model

* add JAX based sampler dependencies

* Update code of conduct (#783)

* Update code of conduct

* update changelog

* [WIP] Fix HSGP predictions (#780)

* Delete all HSGP slices at the same time

* Make interpret consider kwargs in function calls

* Update code of conduct (#783)

* Update code of conduct

* update changelog

* Update formulae to >=0.5.3

* start a test for the hsgp and 'by'

* update changelog

* bayeux 0.1.9 updates

* bump bayeux version

* remove TFP methods, optimizers, and resolve pylint errors

* alternative backends docs

* tests for JAX based samplers except TFP

* add TFP backend example

* add TFP MCMC methods

* don't use flowmc, chees, meads for categorical model

* call model.backend.inference_methods to show list of samplers

* docstring changes

* inference_methods attribute and change JAX random seed

* Add FutureWarning to inference_method parameter

* black formatting and resolve pylint errors

* fix package name

* drop 3.9 and add 3.12 to testing matrix

* change Python versions in requires-python and target-version

* remove python 3.11 black target-version

* pin requires-python to <3.13

* pip upgrade setuptools

* Bump PyMC to 5.12

* Upgrade black and pylint

* remove upgrading of setup tools

---------

Co-authored-by: Tomás Capretto <tomicapretto@gmail.com>
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Add common use cases column to this table
3 participants