Update wiki to reflect current Conduit-Summit codebase
- Rename all pages to match app tab order (01-About through 10-Help)
- Remove redundant File-Upload page (upload is on About tab)
- Add new pages for AI Assistant, Database, DIA-NN QC, View Assay, Traverse tabs
- Rewrite Analysis page with all 9 sub-sections (QC, PCA, Heatmap, Relative Abundance, Explore, Statistics, Enrichment, Pathway, Classification)
- Fill in previously empty H1-Aggregation-Level and H2-Advanced-Settings pages
- Fix outdated references (Conduit-GUI → Conduit-Summit, heat trees → network graph, heatmaply/sechm → pheatmap/plotly)
- Update Home.md table of contents with correct links
cd08223
Updated 04 Analysis (markdown)
5f7f930
Updated 01 File Upload (markdown)
16b1a09
Updated 01 File Upload (markdown)
c304aea
Updated 01 File Upload (markdown)
45bf804
Updated 00 About (markdown)
9853e73
Updated 04 Analysis (markdown)
a747504
Updated 01 File Upload (markdown)
7e09c1d
Updated 00 About (markdown)
881a556
Updated 04 Analysis (markdown)
5da1a6f
Updated 04 Analysis (markdown)
8b73b0b
Updated 04 Analysis (markdown)
38aa10f
Updated H0 Plot Options (markdown)
00531eb
Updated H0 Plot Options (markdown)
155dd5f
Updated 04 Analysis (markdown)
c9ddf39
Updated 00 About (markdown)
4b7c65f
Updated 05 Help (markdown)
133d6f7
Updated H2 Advanced Settings (markdown)
a6be1a2
Updated H1 Aggregation Level (markdown)
ab68c7d
Updated H1 Aggregation Level (markdown)
34a65ba
Updated H0 Plot Options (markdown)
d080044
Updated Advanced Settings (markdown)
d133acb
Updated Aggregation Level (markdown)
965063d
Updated Plot Options (markdown)
5363c05
Destroyed Header (markdown)
1ce91f0