Asses draft genome completeness using a hash based approach.
Concept: Johnathan Wong and Rene L. Warren
Design and implementation: Johnathan Wong
git clone https://github.com/bcgsc/amnatate.git
cd amnatate
meson --prefix /path/to/install build
cd build
ninja install
We recommend creating a fresh environment
conda create --name amnatate
Installing the dependencies
conda install -c conda-forge -c bioconda --file requirements.txt
amnatate Copyright (c) 2022 British Columbia Cancer Agency Branch. All rights reserved.
amnatate is released under the GNU General Public License v3
This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, version 3.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program. If not, see http://www.gnu.org/licenses/.
For commercial licensing options, please contact Patrick Rebstein (prebstein@bccancer.bc.ca).