DIA-NN Docker Container

This repository provides a lightweight Docker image for DIA-NN, a universal software tool for data-independent acquisition (DIA) proteomics data processing.

Overview

DIA-NN is an advanced software solution for DIA proteomics data analysis. This container simplifies the installation and execution of DIA-NN by providing a pre-configured environment, ensuring compatibility and ease of use.

DIANN License

quantms by default uses diann 1.8.1 which license allows quantms to distribute the docker and singularity images. The current version of diann is 1.9.2 which license does not allow quantms or any other platform to distribute the docker and singularity images. Please before using this image, check the license of the diann version you are using and make sure you are compliant with the license.

Image Details

• Base Image: ubuntu:22.04
• DIA-NN Version: 1.9.2
• Maintainer:
  • Yasset Perez-Riverol (ypriverol@gmail.com)
  • Ryan Smith (ryan.smith@imperial.ac.uk)

Features

• Pre-installed dependencies for running DIA-NN:
  • g++, build-essential, cmake
  • Compression libraries: zlib1g-dev, libbz2-dev
  • Boost libraries: libboost-all-dev
  • Tools: wget, locales, unzip
• Configured with en_US.UTF-8 locale for compatibility.
• Includes the latest DIA-NN binary for Linux (1.9.2) as of October 2024.

Usage

Building the Image

To build the Docker image locally:

docker build -t diann:1.9.2 .

Running the Container

docker run -it diann:1.9.2 diann --help