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Improve gVCF support #106

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fnothaft opened this issue Sep 17, 2016 · 1 comment
Closed

Improve gVCF support #106

fnothaft opened this issue Sep 17, 2016 · 1 comment
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@fnothaft
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0.17.0

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@fnothaft
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Specifically, better schema level support for:

  • Symbolic alts
  • Quality score ranges
  • Info END field
@fnothaft fnothaft added this to the 0.10.0 milestone Sep 17, 2016
@fnothaft fnothaft self-assigned this Sep 17, 2016
fnothaft added a commit to fnothaft/bdg-formats that referenced this issue Sep 18, 2016
@fnothaft
Upgrade some fields/documentation to improve gVCF support (resolves b…
087b70b 
…igdatagenomics#106)

* Added `isGvcfReferenceModel` to indicate a site where the variant represents
  a gVCF line without any alternate alleles.
* Added `isSymbolic` and updated `Variant.end` documentation.
* Added `minGenotypeQuality` and `maxGenotypeQuality` fields to Genotype record.
@fnothaft fnothaft mentioned this issue Sep 18, 2016
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@heuermh heuermh mentioned this issue May 17, 2017
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@heuermh heuermh modified the milestones: 0.10.0, 0.12.0 May 23, 2017
@heuermh heuermh mentioned this issue Jan 14, 2019
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@heuermh heuermh modified the milestones: 0.12.0, 0.13.0 Feb 18, 2019
@heuermh heuermh modified the milestones: 0.13.0, 0.14.0 Jul 2, 2019
@heuermh heuermh modified the milestones: 0.14.0, 0.15.0 Aug 10, 2019
@heuermh heuermh modified the milestones: 0.15.0, 0.16.0 Dec 3, 2019
@heuermh heuermh removed this from the 0.16.0 milestone Dec 9, 2020
@heuermh heuermh added this to the 0.17.0 milestone Aug 23, 2021
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heuermh commented Aug 23, 2021

Closing as WontFix

@heuermh heuermh closed this as completed Aug 23, 2021
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[FORMATS-106] Refactor Genotype and GenotypeAnnotation. heuermh/bdg-formats
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@heuermh @fnothaft