Bio2BEL MeSH

Converts the MeSH hierarchy to BEL

Installation

bio2bel_mesh can be installed easily from PyPI with the following code in your favorite terminal:

$ python3 -m pip install bio2bel_mesh

or from the latest code on GitHub with:

$ python3 -m pip install git+https://github.com/bio2bel/mesh.git@master

Setup

MeSH can be downloaded and populated from either the Python REPL or the automatically installed command line utility.

Python REPL

>>> import bio2bel_mesh
>>> mesh_manager = bio2bel_mesh.Manager()
>>> mesh_manager.populate()

Command Line Utility

bio2bel_mesh populate

Links

• MeSH Tree Browser
• SPARQL 1.1 Specification
• MeSH Information
• MeSH FTP
• MeSH RDF Download