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1. differentialabundance differentialabundance Public

   Forked from nf-core/differentialabundance

   Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq

   Nextflow 1

2. tcoffee tcoffee Public

   Forked from cbcrg/tcoffee

   A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence

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3. nf-core-atacseq nf-core-atacseq Public

   Forked from nf-core/atacseq

   ATAC-seq peak-calling, QC and differential analysis pipeline

   Nextflow

4. nf-core-chipseq nf-core-chipseq Public

   Forked from nf-core/chipseq

   ChIP-seq peak-calling, QC and differential analysis pipeline.

   Nextflow

5. bovreg-rnaseq bovreg-rnaseq Public

   Forked from BovReg/nf-core-rnaseq-bovreg

   Main pipeline here:

   Nextflow

6. REforge REforge Public

   Forked from hillerlab/REforge

   Regulatory Element Forward Genomics to associate transcription factor binding site divergence in regulatory elements with phenotypic differences between species

   Python