Example test cases

[da-i]

Hi Brent,

As discussed here is an example of a real world Cyclomicsseq read, since its from an original circle, we know the expected sequence. I've but the arbitrary start at the front of the Expected sequence to make your life a bit easier.

Let me know if you need anything!

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Expected
TTCATCGATACTGGATATGATCAATATCCATGCGATATTGATTAACTGATAAATCATATATGTAGAATATCACATTATATTAATTATAATAAATCGTCGTACATATACATCCACAATTAGCTATGTATACTATCTATAGAGATGGTGCATCATCGTACTCCACCATTCCCACTAGATGCTGCATGACATAGCCCGGCATGCACAGATGTACACGAATCCGTGAGAGTGAAGATCTTATTTGTGACA

254=
TTCATCGATACTGGATATGATCAATATCCATGCGATATTGATTAACTGATAAATCATATATGTAGAATATCACATTATAGTAATTATAATAAATCGTCGTACATATACATCACAGTGGCTTTATGTATACTATCTATAGAGATGGTGCATCATCGGCGCTCCACACACCCATTCCCACTAGATGCTGCATGACATAGCCCGGCATGCACAGATGGCACACGAATCCGTGAGAGTGAAGATCTTATTTGTGACAT

1I20=1D33=1I1X7=1D16=1X30=1D3=1D1=1X1=1X2=2I33=1I1=2X5=5I37=2I2=1X2=2X1=1X12=2I18=1D5=1I
-TCATCGATACTGGATATGATCCAATATCCATGCGATATTGATTAACTGATAAAT-GTATATGTGAGAATATCACATTATATTAATTATAATAAATCGTCGTACATATACATCCACAATTAGC--TATGTATACTATCTATAGAGATGGTGCATCATC-GTACTCCA-----CCATTCCCACTAGATGCTGCATGACATAGCCCGGCAT--ACTGAATGTACACGAATCCGT--GAGTGAAGATCTTATTTGTTGACA-

59=1D20=1X30=1D3=1D1=1X1=1X2=2I18=1X1=1D7=1X1=1I3=1X1=7I3=2X25=2X18=1I1=1X12=2I23=1I
TTCATCGATACTGGATATGATCAATATCCATGCGATATTGATTAACTGATAAATCATATAATGTAGAATATCACATTATATTAATTATAATAAATCGTCGTACATATACATCCACAATTAGC--TATGTATACTATCTATAGGGTATGGTGCGT-ATCAG-------CACCGCCATTCCCACTAGATGCTGCATGACGCAGCCCGGCATGCACAGAT-GTACACGAATCCGT--GAGTGAAGATCTTATTTGTGACA-

79=1X31=1X1=3D1=1X1=1X2=1I1=1X17=1I14=1I1=2X5=5I5=1I32=2I1=1X2=2X1=1X37=1I
TTCATCGATACTGGATATGATCAATATCCATGCGATATTGATTAACTGATAAATCATATATGTAGAATATCACATTATATTAATTATAATAAATCGTCGTACATATACATCCCGCAATTAGC-TGATGTATACTATCTATAG-GATGGTGCATCATC-GTACTCCA-----CCATT-CCACTAGATGCTGCATGACATAGCCCGGCATG--CTGAATGTACACGAATCCGTGAGAGTGAAGATCTTATTTGTGACA-

23=1X55=1X1=1X1=1X20=1D6=1D4=5I1X3=2X5=1D16=1X7=1I1=2X5=5I25=2X12=1X1=1I2=2X1=1X14=1I13=1D10=
TTCATCGATACTGGATATGATCAGTATCCATGCGATATTGATTAACTGATAAATCATATATGTAGAATATCACATTATAATGAGTATAATAAATCGTCGTACATAATACATCCACA-----ATTAGCTATACTTATCTATAGAGATGGTACATCATC-GTACTCCA-----CCATTCCCACTAGATGCTGCATGACGCAGCCCGGCATGCGC-GAATGTACACGAATCCGTGA-AGTGAAGATCTTATTTTGTGACAT

1I14=1D26=1X37=1X26=1X3=1D3=1D1=1X1=1X2=2I33=1I1=2X5=5I5=1D32=1X1=3X3=1I1=1X9=3I1=1X23=1I
-TCATCGATACTGGATTATGATCAATATCCATGCGATATTGAATAACTGATAAATCATATATGTAGAATATCACATTATATTAATTATAATAAATCGTCGTACATATGCATCCACAATTAGC--TATGTATACTATCTATAGAGATGGTGCATCATC-GTACTCCA-----CCATTCCCCACTAGATGCTGCATGACATAGCCCGGCATACCTGGAT-GTACACGAATC---GTGAGTGAAGATCTTATTTGTGACA-
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And another example:
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Predicted_consensus
TAGCCCTGGGCTTCTTGCATTCTGGGACAGCCAAGTCTGTGACTTTGCACGGTCAGTTGCCCTGAGGGCTGGCTTCCATGAGACTTCAATGCCTGGCCGTATCCCCTGCATTTCTTTTGTTTGGAACTTTGGGATTCCTCTTCACCCTTTGGCGGGCATGCACAGATGTACACGAATCCGTGAGTGAAGATCTTATTTGTGACATTCATCGATTCTGGATATGATCAATATCCATGCGATATTGATTAACTGATAAATCATATATATGTAGAATATCACATTATAATAATTATAATAAATCGTCGTACATATACATCCACAATTAGCTATGTATACTATCTATAGAGATGGTGCATCATCGTACTCCACCATTCCCACTGGATGCTGCATGACA

3=1D26=1I23=1I11=2D28=3X1=8D1=1X2=1I36=1I16=1X20=1I7=1X5=1I24=1X5=1D2=3X9=3D1=1X20=4I16=1X1=1X1=2I2=1X18=1X20=2D2=1I7=2X22=1D2=1X1=3D18=1D
TAGCCCTGGGCTTCTTGCATTCTGGGACAG-CAAAGTCTGTGACTTTGCACGGT-CCAGTTGCCCTGAGAGGCTGGCTTCCATGAGACTTCAATGCCTAGCCGTATCCCCTG-CATTTCTTTTGTTTGGAACTTTGGGATTCCTCTTCA-CCTTTGGCGGGCATGCGCAGATGTACACGAATCCGTG-AGTGAAGATCTTA-TTTGTGACATTCATCGATTCTGGACATGATCCAATATCCATACGATATTAATTAACTGATAAATCATATA----TAGAATATCACATTATATTA--ATTATAAATCGTCGTACATATGCATCCACAATTAGCTATGTATGTA-TATCTATAGAGATGGTGCATCATCGTACTCCTACATTCCCACTAGATGCTGCATGACA
381=
TAGCCTGGGCTTCTTGCATTCTGGGACAGCCAAAGTCTGTGACTTTGCACGGTCCCAGTTGCCCTGAGGCTGGCTTCCATGAGACTTCAATGCTGTGCATGTCATTTCTTTTGTTTGGAACTTTGGGATTCCTCTTCACCCTTTGGCGGGCATGCACAGATGTACACGAATCCGTGAAGTGAAGGTCTTATTTTGTGACATTCATCGATTCTGGATATGATCAGCCTCCATACGATGATTAACTGATAAATCATATATATGTAGAATATCACATTATGTGAGTATAATAAATCGTCGTACATATACATCCACAATTAGCTATGTATACTATCTATGAAGATGGTGCATCATCGTACTCCACGTCACTAGATGCTGCATGAC
1D3=1D7=1I20=1I11=1I5=1I3=2I12=2D25=1D3=2X1=1X1=1X1=6D17=1D19=1D30=1X7=2I6=1X4=1I1X32=3X5=1X2=2D25=1I17=1D1X1=1X1=1X26=1I26=2X7=1X16=4D2X18=1D
ATAGCCCTGGGC-TCTTGCATTCTGGGACAGCC-AAGTCTGTGAC-TTGCA-GGT--CAGTTGCCCTGAGGGGCTGGCTTCCATGAGACTTCAATGCCTGGCCGTATCCCCTGCATTTCTTTTGTTTGGAGACTTTGGGATTCCTCTTCACCCCTTTGGCGGGCATGCACAGATGTACACGGATCCGTG--GTGAAGATCTT-GTTTGTGACATTCATCGATTCTGGATATGATCAATATCCATGCGATATGATTAACTGATAAATCATATATA-GTAGAATATCACATTATATTAATTATAATAAATCGTCGTACATATACAT-CACAATTAGCTATGTATACTATCTATAGAGATGGTACATCATCGTACTCCACCATTCCCACTAGATGCTGCATGACA
3=1D28=1I1=1X1=1X17=2I12=1D8=3I14=1D3=2X1=1X1=1X1=6D6=1D39=1X28=2I3=1I2=1X5=1I32=3X5=1X3=3D17=2I15=2I6=1D1X1=1X1=1X29=2D12=2D12=1X1=1D24=4D2X18=1D
TAGCCCTGGGCTTCTTGCATTCTGGGACAGCC-AGGGCTGTGACTTTGCACGGT--CAGTTGCCCTGAGGGCTGGCT---ATGAGACTTCAATGCCTGGCCGTATCCCCTGCATTTCTTTTTGTTTGGAACTTTGGGATTCCTCTTCACCCTTTGGCAGGCATGCACAGATGTACACGAATCCGTG--GTG-AGATCTTA-TTTGTGACATTCATCGATTCTGGATATGATCAATATCCATGCGATATTGATTAACTGATAAATC--ATATATGTAGAATAT--CATTATATTAATTATAATAAATCGTCGTACATATACATCCACGCAATTAGCTATGTATATACTATCTATAAGAGATGGTGCATCATCGTACTCCACCATTCCCACTAGATGCTGCATGACA
3=1D22=1X5=1I21=2I12=2D25=1D3=2X1=1X1=1X1=6D9=3D5=2D31=1X22=3D7=1D7=1X5=1I7=2D25=3X2=1X2=1X3=3D17=2I23=1D1X1=1X1=1X51=1X1=2X24=4D2X18=1D
TAGCCCTGGGCTTCTTGCATTCTGGGGCAGCC-AAGTCTGTGACTTTGCACGGT--CAGTTGCCCTGAGGGGCTGGCTTCCATGAGACTTCAATGCCTGGCCGTATCCCCTGCATTTCTTTTGGTGTTTGCGGAACTTTGGGATTCCTCTTCACCCTTTGGCAGGCATGCACAGATGTACACGAAAAGTCCGTGAGAGTGAAGATCTTA-TTTGTGAAGCATTCATCGATTCTGGATATGATCAATATCAATGCGATATTGATTAACTGATAAATC--ATATATGTAGAATATCACATTATAATAATTATAATAAATCGTCGTACATATACATCCACAATTAGCTATGTATACTATCTGTAGAGATGGTGCATCATCGTACTCCACCATTCCCACTAGATGCTGCATGACA
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