-
Notifications
You must be signed in to change notification settings - Fork 56
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Extra "FORMAT" in the header line #123
Comments
well, that's not good. for now, you'll have to pipe to |
Ran into the same issue. I can probably work around it (bit tricky for my case because inputs sometimes contain samples/sometimes don't), but a fix would be appreciated @brentp :) |
This is fixed in v0.3.4: https://github.com/brentp/vcfanno/releases/tag/v0.3.4 |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
I annotate a VCF file with only 1-8 columns (INFO only), however, the annotated VCF has an extra "FORMAT" field in the header line.
I have tested 0.3.3, 0.3.0 and 0.2.6. The same problem happened.
The text was updated successfully, but these errors were encountered: