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BamUtil->parse_samples - fails when no platform_in but defined in header #13

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keiranmraine opened this issue Nov 27, 2015 · 0 comments
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BamUtil->parse_samples - fails when no platform_in but defined in header #13

keiranmraine opened this issue Nov 27, 2015 · 0 comments
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https://github.com/cancerit/cgpVcf/blob/dev/lib/Sanger/CGP/Vcf/BamUtil.pm#L100
@keiranmraine keiranmraine self-assigned this Nov 27, 2015
@keiranmraine keiranmraine mentioned this issue Nov 27, 2015
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@keiranmraine keiranmraine added this to the v1.2.4 milestone Nov 27, 2015
@keiranmraine keiranmraine modified the milestones: v1.2.4, v1.3.0 Nov 27, 2015
keiranmraine added a commit that referenced this issue Nov 27, 2015
@keiranmraine
Fixes #13
4b5b965
@ghost ghost removed this from the v1.3.0 milestone Jan 5, 2016
@ghost ghost closed this as completed in 458b520 Jan 5, 2016
ghost pushed a commit that referenced this issue Jan 5, 2016
Merge tag 'v1.2.4' into dev
c9f5635 
Now warns when platform passed doesn't match bam, header. Overrides bam header to passed value. Fixes #13
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