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[misc] scib-metrics scripts #945

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[misc] scib-metrics scripts #945

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Commits on Jan 22, 2024

  1. init scripts

    @ebezzi
    ebezzi committed Jan 22, 2024
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  2. add vars

    @ebezzi
    ebezzi committed Jan 22, 2024
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  3. add pickle

    @ebezzi
    ebezzi committed Jan 22, 2024
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  4. Add requirements.txt

    @ebezzi
    ebezzi committed Jan 22, 2024
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Commits on Jan 23, 2024

  1. Add yaml file

    @ebezzi
    ebezzi committed Jan 23, 2024
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  2. typo

    @ebezzi
    ebezzi committed Jan 23, 2024
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  3. changes

    @ebezzi
    ebezzi committed Jan 23, 2024
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  4. changes

    @ebezzi
    ebezzi committed Jan 23, 2024
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  5. add subsetting

    @ebezzi
    ebezzi committed Jan 23, 2024
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  6. add missing embs

    @ebezzi
    ebezzi committed Jan 23, 2024
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  7. fix

    @ebezzi
    ebezzi committed Jan 23, 2024
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Commits on Jan 24, 2024

  1. Add tiledbsoma support

    @ebezzi
    ebezzi committed Jan 24, 2024
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  2. fix indexing

    @ebezzi
    ebezzi committed Jan 24, 2024
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  3. Add asarray

    @ebezzi
    ebezzi committed Jan 24, 2024
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  4. Proper usage of soma_joinid

    @ebezzi
    ebezzi committed Jan 24, 2024
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  5. Proper usage of soma_joinid, pass 2

    @ebezzi
    ebezzi committed Jan 24, 2024
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Commits on Feb 20, 2024

  1. try: ilisi_knn metric

    @ebezzi
    ebezzi committed Feb 20, 2024
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Commits on Feb 21, 2024

  1. fix matrix

    @ebezzi
    ebezzi committed Feb 21, 2024
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  2. metric fix

    @ebezzi
    ebezzi committed Feb 21, 2024
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Commits on Jul 1, 2024

  1. Update to scib 0.5

    @ebezzi
    ebezzi committed Jul 1, 2024
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  2. Merge branch 'main' into ebezzi/scib-metrics-scripts

    @ebezzi
    ebezzi committed Jul 1, 2024
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  3. Add classifier metrics

    @ebezzi
    ebezzi committed Jul 1, 2024
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  4. All metrics

    @ebezzi
    ebezzi committed Jul 1, 2024
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Commits on Jul 2, 2024

  1. fix missing key

    @ebezzi
    ebezzi committed Jul 2, 2024
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  2. Change query

    @ebezzi
    ebezzi committed Jul 2, 2024
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Commits on Jul 5, 2024

  1. Fixes

    @ebezzi
    ebezzi committed Jul 5, 2024
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Commits on Jul 9, 2024

  1. Add ignore directives

    @ebezzi
    ebezzi committed Jul 9, 2024
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  2. [misc] update metrics script for 2024 LTS

    @pablo-gar
    pablo-gar authored Jul 9, 2024
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  3. Entropy fix

    @ebezzi
    ebezzi committed Jul 9, 2024
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  4. Merge branch 'ebezzi/scib-metrics-scripts' of github.com:chanzuckerbe… 

    …rg/cell-census into ebezzi/scib-metrics-scripts
    @ebezzi
    ebezzi committed Jul 9, 2024
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  5. Lint

    @ebezzi
    ebezzi committed Jul 9, 2024
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Commits on Jul 10, 2024

  1. add plotting scripts

    @pablo-gar
    pablo-gar committed Jul 10, 2024
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Commits on Jul 12, 2024

  1. update metrics plotting script

    @pablo-gar
    pablo-gar committed Jul 12, 2024
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