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Dealing with changes in rhdf5 #14

Merged
merged 2 commits into from
Jan 31, 2018
Merged

Dealing with changes in rhdf5 #14

merged 2 commits into from
Jan 31, 2018

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grimbough
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The behaviour of rhdf5::H5close() has changed as a result of updating the underlying HDF5 library. Invoking H5close() now not only closes any open object handles, but also shuts down the C-library so nothing works after, rending it fairly useless. The functionality to close any open objects can now be achieved with h5closeAll().

The changes in this pull request should make the affected cmapR functions compatible with both the 'old' version of rhdf5 e.g. versions < 2.23.0, and also the changed behaviour in rhdf5 >= 2.23.0.

@tnat1031
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Thanks @grimbough, looks good!

@tnat1031 tnat1031 merged commit 8457713 into cmap:master Jan 31, 2018
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2 participants