Fix sequana#84 : remove deprecated and old Options

cokelaer · Jan 13, 2024 · eab4404 · eab4404
1 parent 33e6ff2
commit eab4404
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Showing 18 changed files with 161 additions and 638 deletions.
diff --git a/README.rst b/README.rst
@@ -313,6 +313,7 @@ Changelog
 ========= ======================================================================
 Version   Description
 ========= ======================================================================
+0.17.0    * Remove deprecated options and deprecated functions. More tests.
 0.16.9    * Fix slurm sys exit (replaced by print)
           * upadte doc
           * more tests

diff --git a/pyproject.toml b/pyproject.toml
@@ -6,7 +6,7 @@ build-backend = "poetry.core.masonry.api"
 #maintainer ?#maintainer email
 [tool.poetry]
 name = "sequana_pipetools"
-version = "0.16.9"
+version = "0.17.0"
 description = "A set of tools to help building or using Sequana pipelines"
 authors = ["Sequana Team"]
 license = "BSD-3"

diff --git a/sequana_pipetools/misc.py b/sequana_pipetools/misc.py
@@ -95,17 +95,17 @@ def print_version(name):
         print(f"sequana_{name} version: ?")
 
     try:
-        version = get_package_version(f"sequana")
+        version = get_package_version("sequana")
         print(f"Sequana version: {version}")
     except Exception:  # pragma: no cover
-        pass
+        print(f"Sequana version: not found")
 
     try:
-        version = get_package_version(f"sequana_pipetools")
+        version = get_package_version("sequana_pipetools")
         print(f"Sequana_pipetools version: {version}")
     except Exception as err:  # pragma: no cover
         print(err)
-        print("Sequana_pipetools version: ?")
+        print("Sequana_pipetools version: not found")
 
     print(Colors().purple("\nHow to help ?\n- Please, consider citing us (see sequana.readthedocs.io)"))
     print(Colors().purple("- Contribute to the code or documentation"))