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82 Open 122 Closed
82 Open 122 Closed
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Issues list

Function to merge dBGs
#204 opened Jul 3, 2016 by alexbowe
Use sd_vector_builder during colour matrix construction enhancement
#203 opened Jun 28, 2016 by alexbowe
@alexbowe
Calculate progress statistics during merging
#202 opened Jun 23, 2016 by alexbowe
@mmuggli
Gather statistics of frequency of kmers after union
#201 opened Jun 23, 2016 by alexbowe
@mmuggli
Verify path divergence algorithm matches Cortex
#200 opened Jun 23, 2016 by alexbowe
@mmuggli
Add in-memory construction (for use when missing STXXL config)
#199 opened Jun 23, 2016 by alexbowe
Update Cosmo to work with Boost API changes past v1.54
#198 opened Jun 23, 2016 by alexbowe
Get Cosmo compiling with Clang
#197 opened Jun 7, 2016 by alexbowe
Add support for node lookup by label enhancement
#195 opened May 19, 2016 by alexbowe CDBG Master
@alexbowe
Fix broken incoming() in non-shifted dBG representation bug
#194 opened May 12, 2016 by alexbowe
@alexbowe
Attempt simulation of iterative dBG assembly with varord docs experiment to-discuss
#193 opened May 12, 2016 by alexbowe
Improve memory efficiency enhancement epic
#188 opened May 12, 2016 by alexbowe
Improve dummy shift merging enhancement
#187 opened May 12, 2016 by alexbowe
@alexbowe
Add zenodo DOI badge
#186 opened May 12, 2016 by alexbowe
Disable STXXL-MSGs and make config for COSMO_LOG
#184 opened May 9, 2016 by alexbowe
Fix backward() and indegree in dummy-free representation
#183 opened May 9, 2016 by alexbowe
Refactor Input Parsing enhancement
#182 opened May 1, 2016 by alexbowe
Use techniques in "why GNU grep is fast" in path divergence
#181 opened Apr 25, 2016 by mmuggli
3
Can we store colours for just supernodes instead? enhancement
#180 opened Apr 25, 2016 by alexbowe
efficiently check nodes for a batch of colors enhancement
#179 opened Apr 23, 2016 by mmuggli
1
Support indirect sorting (so colour payload is an index rather than bitvector) enhancement
#178 opened Apr 22, 2016 by mmuggli
4
Simulate Table A with multiple passes of Table B enhancement
#177 opened Apr 19, 2016 by alexbowe
@alexbowe
Remove STXXL materialize calls enhancement
#176 opened Apr 19, 2016 by alexbowe
@alexbowe
Improve BGL adapter enhancement
#174 opened Apr 14, 2016 by alexbowe
Add coverage data for colors enhancement
#173 opened Apr 14, 2016 by alexbowe
1 task
@mmuggli
ProTip! no:milestone will show everything without a milestone.