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pango designation v1.22
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@AngieHinrichs AngieHinrichs released this 18 Aug 03:07
· 1310 commits to master since this release
v1.22
a4ebdd4

Release notes

ed6f4b2 - Cornelius Roemer, 2023-06-26 12:30:46 +0200 : Designate DV.7.1 (S:L455F, S:F456L, Spain/Austria, lineage-proposals#135) with 14 seqs
ca84b09 - Cornelius Roemer, 2023-06-26 12:35:59 +0200 : Designate GW.1 (XBB.1.19.1.1, ORF1a:D264N, N:M322V, China) with 140 seqs
23e89d6 - Cornelius Roemer, 2023-06-26 12:37:30 +0200 : Designate GW.2 (S:D936G, USA) with 100 seqs
83a1f8a - Cornelius Roemer, 2023-06-26 19:51:32 +0200 : Designate GY.1 (XBB.1.16.2.1, S:L84I, ORF1a:A4068S, China, from #2066) with 80 seqs
995d8c2 - Cornelius Roemer, 2023-06-26 20:12:17 +0200 : Designate GY.2 (XBB.1.16.2.2, S:T883I) with 25 seqs
664200c - Cornelius Roemer, 2023-06-26 20:15:56 +0200 : Designate BN.1.2.7 (N:N8S, C16332T, Taiwan, from #1923) with 80 seqs
939990f - Cornelius Roemer, 2023-06-26 20:31:09 +0200 : Designate GJ.1.2 (XBB.2.3.3.1.2, ORF1b:V1110I, from #2059) with 200 seqs
7fed7cc - Cornelius Roemer, 2023-06-28 13:33:09 +0200 : Designate FL.13.2 (S:K356T, China, from #2073) with 30 seqs
20e6497 - Cornelius Roemer, 2023-06-28 13:44:19 +0200 : Designate FL.18 (ORF1a:T2007I) with 800 seqs
c07ae4b - Cornelius Roemer, 2023-06-28 15:55:05 +0200 : Designate FL.18.1 (N:T166I, A27507C, from #2019) with 200 seqs
23cfb26 - Cornelius Roemer, 2023-06-28 16:00:13 +0200 : Designate FL.18.1.1 (S:Y200C, S:478R, Australia/Indonesia) with 20 seqs
8e3e5bb - Cornelius Roemer, 2023-06-28 18:44:32 +0200 : Designate XBB.1.5.88 (C2299T, South Africa) with 200 seqs
d535b36 - Cornelius Roemer, 2023-06-28 18:51:47 +0200 : Designate GZ.1 (XBB.2.3.4.1, S:F186L, India-GJ) with 80 seqs
b45620c - Cornelius Roemer, 2023-06-28 19:30:14 +0200 : Designate HA.1 (XBB.1.5.86.1, S:F456L (22930A), Brazil/Canada) and HA.2 (S:P521S, Brazil) with 50 seqs each
d973087 - Cornelius Roemer, 2023-06-28 19:37:49 +0200 : Designate XBB.1.5.89 (S:478R, S:554A, Canada/Italy/France) with 40 seqs
3e1a8b0 - Cornelius Roemer, 2023-06-28 21:22:02 +0200 : Add extra XBB.1.16.6 designations
aaee4fd - Cornelius Roemer, 2023-06-28 21:23:34 +0200 : Add extra XBB.1.16.9 designations
3c00ba8 - Cornelius Roemer, 2023-06-28 21:24:49 +0200 : Add extra FL.1.5.1 designations
5bb0fae - Cornelius Roemer, 2023-06-28 21:33:51 +0200 : Designate HB.1 (XBB.1.34.2.1, S:F456L (22928C), US/China/Canada, from sars-cov-2-variants/lineage-proposals#217) with 10 seqs
7f13742 - Cornelius Roemer, 2023-06-28 21:41:40 +0200 : Designate EG.2.1 (S:F456L (T22930A), S:V327I, Indonesia/US/Australia) with 5 seqs
c65ee84 - Cornelius Roemer, 2023-06-28 21:48:49 +0200 : Designate HC.1 (XBB.1.5.44.1, S:P631S, USA) with 30 seqs
971191a - Cornelius Roemer, 2023-06-28 21:53:40 +0200 : Designate FL.19 (XBB.1.9.1.18, T2377C) with 500 seqs
80a1671 - Cornelius Roemer, 2023-06-28 22:02:14 +0200 : Designate FU.3 (XBB.1.16.1.3, C11665T, India) with 190 seqs
4dd681b - Cornelius Roemer, 2023-06-28 23:08:12 +0200 : Designate BQ.1.1.79 (S:Q613H, C1594T, C16362T, T24079C, Greece) with 300 seqs
21b34b0 - Cornelius Roemer, 2023-06-29 23:29:20 +0200 : Designate FL.20 (S:F456L (22928C), S:Q52H, Spain, from #2072) with 20 seqs
1a8596e - Cornelius Roemer, 2023-06-29 23:50:07 +0200 : Designate XBB.1.31.1 (S:E553K, Indonesia) with 19 seqs
0dfab29 - Cornelius Roemer, 2023-06-29 23:53:31 +0200 : Designate FL.1.7 (S:478R, S:C1235F, Indonesia) with 30 seqs
33d7bbe - Cornelius Roemer, 2023-06-29 23:58:08 +0200 : Designate FL.1.1.1 (S:A688S, Australia/Mauritius) with 30 seqs
40d135d - Cornelius Roemer, 2023-06-30 00:08:51 +0200 : Designate FL.4.4 (ORF1a:T1542I, T24544C, S:478T (reversion), Indonesia) with 70 seqs
fd41be6 - Cornelius Roemer, 2023-06-30 00:11:54 +0200 : Designate FL.4.5 (ORF8:S67F, ORF1a:D1228G, C23635T) with 600 seqs
02d6085 - Cornelius Roemer, 2023-06-30 00:13:33 +0200 : Designate FL.4.6 (T5098C, C13965T, Australia/China) with 400 seqs
ec23e4a - Cornelius Roemer, 2023-06-30 00:18:40 +0200 : Designate FL.4.1.1 (S:K478R, ORF1a:I2286T, Indonesia/Australia) with 20 seqs
80dc246 - Cornelius Roemer, 2023-06-30 00:20:40 +0200 : Designate FL.4.7 (S:L452R, Singapore) with 20 seqs
6e6ced5 - Cornelius Roemer, 2023-06-30 11:56:49 +0200 : Designate GY.3 (S:M177I, Thailand) with 30 seqs
a76d1de - Cornelius Roemer, 2023-06-30 11:58:02 +0200 : Designate GY.2.1 (S:S255F, South Korea) with 20 seqs
1a630a8 - Cornelius Roemer, 2023-06-30 12:00:44 +0200 : Designate XBB.1.16.12 (S:Q52H, South Korea) with 60 seqs
c411680 - Cornelius Roemer, 2023-06-30 12:02:45 +0200 : Designate XBB.1.16.13 (ORF1a:G519S, ORF1a:G1101D, India) with 300 seqs
51bc6d4 - Cornelius Roemer, 2023-06-30 12:06:48 +0200 : Designate FL.21 (XBB.1.9.1.21, A10564T, South Korea/China) with 300 seqs
00647cb - Cornelius Roemer, 2023-06-30 12:08:34 +0200 : Designate FL.5.1 (S:M177T) with 100 seqs
2504a6d - Cornelius Roemer, 2023-06-30 12:10:57 +0200 : Designate EG.1.4.1 (S:P217L, South Korea) with 80 seqs
317f95f - Cornelius Roemer, 2023-06-30 12:13:20 +0200 : Designate GD.2 (S:L212S, Philippines) with 100 seqs
1809d78 - Cornelius Roemer, 2023-06-30 12:14:42 +0200 : Designate GD.3 (S:F59L, Russia) with 80 seqs
019df7f - Cornelius Roemer, 2023-06-30 12:16:39 +0200 : Designate EG.1.5 (S:S98F, Europe) with 90 seqs
8492ad8 - Cornelius Roemer, 2023-06-30 12:18:32 +0200 : Designate EG.8 (ORF1a:S2303F, Europe) with 130 seqs
73d070d - Cornelius Roemer, 2023-06-30 12:25:53 +0200 : Designate FL.22 (ORF1b:I1416V, T24184C) with 300 seqs
ea90ffe - Cornelius Roemer, 2023-06-30 12:27:24 +0200 : Designate FL.23 (ORF1b:V1132I, Philippines) with 200 seqs
3645109 - Cornelius Roemer, 2023-06-30 12:31:12 +0200 : Designate FY.6 (T2935C, ORF1a:A591V, France) with 180 seqs
01cf28d - Cornelius Roemer, 2023-07-09 15:56:14 +0200 : Designate CM.8.1.5 (S:K150E, S:Y248H, N:A155V, Philippines) with 20 seqs
662800b - Cornelius Roemer, 2023-07-09 16:14:16 +0200 : Designate CK.1.1.1. (S:E654K, G6742T, C8782T, Japan) and CK.1.3 (Mexico, S:F157L, S:G181V)
daeb496 - Cornelius Roemer, 2023-07-09 16:16:58 +0200 : Designate CK.1.4 (C25614T, C10228T, C25824T, C27741T) with 1k seqs
b5aedd0 - Cornelius Roemer, 2023-07-09 16:19:08 +0200 : Designate CK.1.5 (C9118T, C15951T, ORF1a:M3733V, on C25614T branch) with 500 seqs
c65d4df - Cornelius Roemer, 2023-07-09 16:27:05 +0200 : Designate FR.1.4 (A3715G, C15960T, on shared T2372C, C7318T, ORF1a:L293F branch with FR.1.1, China) with 100 seqs
9f92dc5 - Cornelius Roemer, 2023-07-09 16:30:26 +0200 : Designate GQ.1.1 (S:G213E, New Zealand) with 20 seqs
049c18c - Cornelius Roemer, 2023-07-09 16:34:28 +0200 : Designate FK.1.3.1 (S:E583D, Australia) and FK.1.3.2 (C9391T, T13596C, Australia/Japan)
ba63b28 - Cornelius Roemer, 2023-07-09 16:37:43 +0200 : Designate FK.1.5 (G5155A, C12439T, Australia/New Zealand) with 200 seqs
5cd7ffd - Cornelius Roemer, 2023-07-09 16:40:42 +0200 : Designate CJ.1.3.1 (S:R214S, ORF1a:G3578S, South Korea/Japan) with 40 seqs
f0582e1 - Cornelius Roemer, 2023-07-09 16:42:24 +0200 : Designate CJ.1.3.2 (S:D936H, South Korea) with 200 seqs
9e3c876 - Cornelius Roemer, 2023-07-09 19:07:57 +0200 : Designate EU.1.1.3 (S:F157L, Europe) with 60 seqs
c8cadb0 - Cornelius Roemer, 2023-07-09 19:10:44 +0200 : Designate FL.24 (S:Q613H, S:A688V) with 80 seqs
a2a5587 - Cornelius Roemer, 2023-07-09 19:14:23 +0200 : Add extra EG.7 designations
5648ff2 - Cornelius Roemer, 2023-07-10 11:43:01 +0200 : Designate XBB.1.16.14 (S:L452Q, after A11782G, India/France/Canada) with 25 seqs
6a905e3 - Cornelius Roemer, 2023-07-10 12:02:10 +0200 : Designate XBB.1.5.90 (S:P621S, ORF1ab:S6713L, Belgium/France) with 200 seqs
bf7f18a - Cornelius Roemer, 2023-07-10 12:04:27 +0200 : Designate XBB.1.5.91 (S:P621S, USA) with 400 seqs
cbbfabf - Cornelius Roemer, 2023-07-10 12:09:21 +0200 : Designate FL.25 (S:E554K, USA/England) with 120 seqs
83a6944 - Cornelius Roemer, 2023-07-10 12:11:49 +0200 : Designate FL.2.4 (ORF8:S67F, China) with 300 seqs
8a47ca9 - Cornelius Roemer, 2023-07-10 12:15:10 +0200 : Designate XCF.1 (S:F157L, USA) with 10 seqs
9a507d8 - Cornelius Roemer, 2023-07-10 12:16:20 +0200 : Designate XCF.2 (S:S929I, Canada) with 15 seqs
3115358 - Cornelius Roemer, 2023-07-10 12:20:14 +0200 : Designate FL.26 (C22264T) with 300 seqs
c2eaf5e - Cornelius Roemer, 2023-07-10 12:21:11 +0200 : Designate FL.26.1 (S:493L, Sweden) with 40 seqs
5780e06 - Cornelius Roemer, 2023-07-10 12:44:21 +0200 : Designate GK.2 (XBB.1.5.70.2, S:V511I) with 20 seqs
7c2e3c0 - Cornelius Roemer, 2023-07-11 11:16:57 +0200 : Add relevant issues to lineage notes
bb5a2d6 - Cornelius Roemer, 2023-07-11 17:48:45 +0200 : Designate FU.4 (S:Y453F, T29410C) with 12 seqs
4f8b6f0 - Cornelius Roemer, 2023-07-11 17:55:53 +0200 : Designate XBB.1.5.92 (ORF1a:T1168I, Ecuador) with 150 seqs
08e3e8b - Cornelius Roemer, 2023-07-11 18:02:21 +0200 : Designate XBB.1.5.93 (C337T, C19186T, USA, 77 seqs) and HD.1 (S:T346I, USA/Dominican Republic, 10 seqs)
115963b - Cornelius Roemer, 2023-07-13 01:27:06 +0200 : Designate XBB.1.16.15 (S:P521S, T10756C, T14067C, on C27513T branch) with 30 seqs
d951ada - Cornelius Roemer, 2023-07-13 23:41:53 +0200 : Designate GK.1.1 (XBB.1.5.70.1.1, S:T573I, Brazil) with 6 seqs
7afb37c - Cornelius Roemer, 2023-07-13 23:42:53 +0200 : Designate GK.1.2 (XBB.1.5.70.1.2, S:N185D, Brazil) with 7 seqs
fe717fc - Cornelius Roemer, 2023-07-13 23:44:22 +0200 : Designate GK.1.3 (ORF1a:E633A, ORF1b:D1130G, USA/Canada)
5420763 - Cornelius Roemer, 2023-07-13 23:45:59 +0200 : Designate additional GK.1 sequences
80108f5 - Cornelius Roemer, 2023-07-14 00:05:03 +0200 : Designate HE.1 (FE.1.1.1, S:V622I, ORF8:A55V, USA/Puerto Rico) with 180 seqs
c2d2412 - Cornelius Roemer, 2023-07-14 00:08:29 +0200 : Designate FE.1.1.3 (XBB.1.18.1.1.1.3, A24775G, China) with 75 seqs
aa955b5 - Cornelius Roemer, 2023-07-14 00:09:45 +0200 : Designate FE.1.1.4 (XBB.1.18.1.1.1.4, A4336G, T24073C, Brazil) with 50 seqs
c36d5d6 - Cornelius Roemer, 2023-07-14 00:33:35 +0200 : Designate HF.1 (XBB.1.16.13.1, S:K304N, South Korea/Japan) with 140 seqs
df3436b - Cornelius Roemer, 2023-07-14 00:41:06 +0200 : Designate XBB.1.16.16 (S:Q613H, S:S412N, India-GJ/USA/Pakistan) with 60 seqs
1871d61 - Cornelius Roemer, 2023-07-14 10:55:17 +0200 : Designate HG.1 (XBB.2.3.8.1, S:S98F, South Korea) with 35 seqs
db06f28 - Cornelius Roemer, 2023-07-14 10:59:54 +0200 : Designate XBB.2.3.13 (ORF1a:T1822I, Spain) with 150 seqs
91f8f7b - Cornelius Roemer, 2023-07-14 11:01:16 +0200 : Designate XBB.2.3.14 (ORF1a:Q998H) with 120 seqs
5373474 - Cornelius Roemer, 2023-07-14 11:12:33 +0200 : Designate XBB.1.49 (S:346S, S:486P, on C16648A, A27965G, pre ORF8:8* branch with XBB.1.33, Somalia) with 9 seqs
b9e8cf4 - Cornelius Roemer, 2023-07-14 11:17:19 +0200 : Designate GJ.3 (XBB.2.3.3.3, ORF1a:P971S, ORF1b:V2371L) with 200 seqs
cc0c6b0 - Cornelius Roemer, 2023-07-14 11:35:52 +0200 : Designate XBB.1.5.94 (S:Q613H, T25461C, France) with 350 seqs
c17085b - Cornelius Roemer, 2023-07-14 11:41:47 +0200 : Designate EG.1.6 (XBB.1.9.2.1.6, G26235T) with 1.5k seqs
b695ac6 - Cornelius Roemer, 2023-07-14 11:45:07 +0200 : Designate HH.1 (XBB.2.3.2.1, ORF1a:T2977I, T20697C) with 1.2k seqs
a324a89 - Cornelius Roemer, 2023-07-14 11:45:56 +0200 : Designate HH.1.1 (XBB.2.3.2.1.1, S:G181A) with 100 seqs
c95c3fe - Cornelius Roemer, 2023-07-14 11:47:10 +0200 : Designate HH.2 (XBB.2.3.2.2, ORF1a:D48Y) with 270 seqs
bc405aa - Cornelius Roemer, 2023-07-14 11:49:48 +0200 : Designate CM.7.1.1 (S:R403K, Europe, from sars-cov-2-variants/lineage-proposals#37) with 15 seqs
6031f74 - Cornelius Roemer, 2023-07-17 11:19:22 +0200 : Designate XBB.1.42.1 (S:478R) with 30 seqs
60c4dd9 - Cornelius Roemer, 2023-07-17 11:23:08 +0200 : Designate XBB.1.12.1 (S:Q613H, S:E1202Q, Argentina/Chile/Spain) with 15 seqs
e1fa315 - Yat-sing Ng, 2023-07-17 17:24:27 +0800 : Update lineage_notes.txt (#2097)
b38c35a - Xu Zou, 2023-07-17 21:35:55 +0800 : Add some issue refs (#2098)
eb76e85 - Memorable, 2023-07-17 21:36:21 +0800 : Update lineage_notes.txt (#2100)
568a2df - Federico Gueli, 2023-07-17 15:36:38 +0200 : Update lineage_notes.txt (#2102)
c2f0324 - Federico Gueli, 2023-07-17 15:36:55 +0200 : Update lineage_notes.txt (#2103)
feb1127 - Federico Gueli, 2023-07-17 15:38:23 +0200 : Update lineage_notes.txt (#2104)
45a4f84 - Memorable, 2023-07-18 16:53:04 +0800 : Update lineage_notes.txt (#2106)
7507cc9 - Memorable, 2023-07-18 16:56:41 +0800 : Update lineage_notes.txt (#2108)
856bf3c - Xu Zou, 2023-07-18 23:39:00 +0800 : add some issue refs (#2111)
8fdcc3a - aviczhl2, 2023-07-19 10:13:46 +0800 : new file: automated-issue-ref.ipynb
5c5cf34 - aviczhl2, 2023-07-19 12:32:03 +0800 : modified: automated-issue-ref.ipynb new file: milestone.txt
b2d040f - aviczhl2, 2023-07-19 15:30:20 +0800 : modified: automated-issue-ref.ipynb new file: autoref/milestone.txt deleted: milestone.txt
ff8238e - aviczhl2, 2023-07-19 17:21:26 +0800 : modified: automated-issue-ref.ipynb modified: autoref/milestone.txt new file: autoref/missing_refs.txt
7a62b9f - Cornelius Roemer, 2023-07-19 13:14:14 +0200 : Designate GY.4 (XBB.1.16.2.4, S:N450K, C29095T, Laos) with 9 seqs
0fc819e - Cornelius Roemer, 2023-07-19 13:15:47 +0200 : Designate GY.5 (XBB.1.16.2.5, G9190C) with 500 seqs
171a8d1 - Cornelius Roemer, 2023-07-19 13:16:59 +0200 : Designate GY.6 (XBB.1.16.2.6, ORF1a:V1765I) with 270 seqs
38e6da4 - Cornelius Roemer, 2023-07-19 13:20:06 +0200 : Designate EG.4.1 (XBB.1.9.2.4.1, S:I870V, N:A119S) with 70 seqs
e5b34bb - Cornelius Roemer, 2023-07-19 13:21:18 +0200 : Designate EG.4.2 (S:A623V, T14652C, China) with 50 seqs
7966467 - Cornelius Roemer, 2023-07-19 13:22:21 +0200 : Designate EG.4.3 (XBB.1.9.2.4.3, S:Q613H) with 60 seqs
6669316 - Cornelius Roemer, 2023-07-19 13:24:56 +0200 : Designate XBB.1.31.2 (ORF1a:A1049V, Indonesia) with 100 seqs
8daea5c - Cornelius Roemer, 2023-07-19 13:27:16 +0200 : Designate GY.7 (XBB.1.16.2.7, ORF1a:G3617C, G5515T, Thailand/Laos) with 80 seqs
9574026 - Cornelius Roemer, 2023-07-19 13:29:40 +0200 : Designate XBB.1.5.95 (ORF1:A1851V) with 1000 seqs
2d9f73d - Cornelius Roemer, 2023-07-19 13:31:51 +0200 : Designate HJ.1 (XBB.1.5.1.1, S:E324K, C4543T, USA) with 150 seqs
75a31b2 - Cornelius Roemer, 2023-07-19 13:33:12 +0200 : Designate XBB.1.5.96 (C28603T) with 650 seqs
7c06b9e - Cornelius Roemer, 2023-07-19 13:34:44 +0200 : Designate FU.3.1 (XBB.1.16.1.3.1, S:G184S) with 20 seqs
9c16a93 - Cornelius Roemer, 2023-07-19 13:36:48 +0200 : Designate GW.3 (XBB.1.19.1.2, ORF1a:S100N, ORF1a:N3537S) with 80 seqs
00437de - Cornelius Roemer, 2023-07-19 13:37:40 +0200 : Designate GW.4 (ORF1a:M3280I) with 70 seqs
aa879db - Cornelius Roemer, 2023-07-19 13:39:50 +0200 : Designate FL.23.1 (XBB.1.9.1.23.1, ORF1a:A2584V, C8016, C8311T) with 130 seqs
8d8123b - Cornelius Roemer, 2023-07-19 13:42:15 +0200 : Designate FL.27 (XBB.1.9.1.27, ORF1a:V3747I) with 800 seqs
5a81757 - Cornelius Roemer, 2023-07-19 13:44:17 +0200 : Designate FD.4.1 (XBB.1.5.15.4.1, ORF1a:T4355I, ORF1b:I2634F) with 400 seqs
89f17cd - Xu Zou, 2023-07-19 23:14:23 +0800 : Merge branch 'cov-lineages:master' into master
2acb724 - aviczhl2, 2023-07-19 23:59:53 +0800 : modified: automated-issue-ref.ipynb
8a61f0d - aviczhl2, 2023-07-20 10:38:33 +0800 : modified: lineage_notes.txt
32b172d - Angie Hinrichs, 2023-07-19 20:02:24 -0700 : Merge pull request #2113 from aviczhl2/master
05f1b08 - Xu Zou, 2023-07-20 16:19:32 +0800 : Add some issue refs without milestones
06e73b0 - Angie Hinrichs, 2023-07-20 09:33:40 -0700 : Merge pull request #2114 from aviczhl2/master
9fb2234 - aviczhl2, 2023-07-21 12:52:14 +0800 : modified: automated-issue-ref.ipynb modified: autoref/milestone.txt new file: autoref/milestone_sub.txt modified: autoref/missing_refs.txt
6735f4f - aviczhl2, 2023-07-21 12:53:00 +0800 : modified: lineage_notes.txt
21d52ef - HynnSpylor, 2023-07-21 15:57:17 +0800 : Update lineage_notes.txt
2929a05 - Angie Hinrichs, 2023-07-21 10:00:13 -0700 : Merge pull request #2118 from aviczhl2/master
076607c - Angie Hinrichs, 2023-07-21 10:53:36 -0700 : Merge pull request #2119 from HynnSpylor/patch-1
ad56c13 - Yat-sing Ng, 2023-07-22 03:52:33 +0800 : Update lineage_notes.txt
ac3dade - Angie Hinrichs, 2023-07-21 13:13:11 -0700 : Merge pull request #2120 from Over-There-Is/patch-2
a20992b - Cornelius Roemer, 2023-07-23 15:33:22 +0200 : Designate GN.2 (XBB.1.5.73.2, ORF3a:A99G, Peru) with 25 seqs
3cc23f5 - aviczhl2, 2023-07-23 21:33:45 +0800 : modified: automated-issue-ref.ipynb modified: autoref/milestone_sub.txt modified: autoref/missing_refs.txt
5772805 - aviczhl2, 2023-07-23 21:34:15 +0800 : modified lineage_notes.txt and add 4 refs.
9deedad - Xu Zou, 2023-07-23 21:35:17 +0800 : Merge branch 'cov-lineages:master' into master
f7f0271 - Cornelius Roemer, 2023-07-23 15:36:06 +0200 : Designate GN.1.1 (XBB.1.5.73.1.1, ORF1b:A1643V, Peru) with 25 seqs
cacc5b0 - Cornelius Roemer, 2023-07-23 15:38:28 +0200 : Designate GN.3 (XBB.1.5.73.3, C27143T, Peru) with 150 seqs
f2131fd - Cornelius Roemer, 2023-07-23 15:39:11 +0200 : Designate GN.4 (XBB.1.5.73.4, ORF1a:Q3966L, Peru) with 80 seqs
59ad85e - Cornelius Roemer, 2023-07-23 15:40:33 +0200 : Designate GN.5 (XBB.1.5.73.5, ORF1a:L1110I, ORF1a:S4135F, Peru) with 40 seqs
240d38f - Cornelius Roemer, 2023-07-23 15:42:55 +0200 : Designate EG.5.1.2 (XBB.1.9.2.5.1.2, Japan, ORF1b:V1644I) with 60 seqs
90d48d5 - Cornelius Roemer, 2023-07-23 15:44:11 +0200 : Designate EG.5.1.3 (XBB.1.9.2.5.1.3, ORF1a:R542C, C22570T) with 120 seqs
aa93992 - Cornelius Roemer, 2023-07-23 15:45:34 +0200 : Designate EG.5.1.4 (XBB.1.9.2.5.1.4, ORF1b:K2557R) with 120 seqs
e3394b0 - Cornelius Roemer, 2023-07-23 15:47:09 +0200 : Designate EG.5.1.5 (XBB.1.9.2.5.1.5, ORF1a:L3293I, ORF1b:T1274I, ORF1b:L2349V, Portugal) with 40 seqs
55ac27d - Cornelius Roemer, 2023-07-23 15:49:59 +0200 : Designate HK.1 (EG.5.1.1.1, S:G257V, China) with 30 seqs
00204cc - Cornelius Roemer, 2023-07-23 15:52:02 +0200 : Designate HK.2 (EG.5.1.1.2, S:Q14H, China) with 13 seqs
39a35ba - Cornelius Roemer, 2023-07-23 15:54:03 +0200 : Designate HK.3 (EG.5.1.1.3, S:L455F, China) with 7 seqs
e11ebdd - Cornelius Roemer, 2023-07-23 15:56:09 +0200 : Designate HK.4 (S:T883I, China), HK.5 (S:Q677H, China) with 10 seqs each
a65b322 - Cornelius Roemer, 2023-07-23 15:57:47 +0200 : Designate EG.5.1.6 (S:F157L, ORF1a:S1857L, USA) with 25 seqs
f5fda99 - Cornelius Roemer, 2023-07-23 16:09:39 +0200 : Designate FT.2 (XBB.1.5.39.2, S:K1045N, Canada-QC/USA-NY) with 40 seqs
fb827c8 - Cornelius Roemer, 2023-07-23 16:11:33 +0200 : Designate FT.3 (XBB.1.5.39.3, S:Q52H, USA) with 180 seqs
bf9087d - Cornelius Roemer, 2023-07-23 16:13:05 +0200 : Designate FT.3.1 (XBB.1.5.39.3.1, S:K478R, S:D1168H, Canada/USA) with 35 seqs
5fdeba3 - Cornelius Roemer, 2023-07-23 16:14:42 +0200 : Designate FT.4 (XBB.1.5.39.4, S:E180Q, Germany) with 70 seqs
32f5f23 - Cornelius Roemer, 2023-07-23 16:53:53 +0200 : Designate GA.4 (XBB.1.17.1.4, S:K356T, ORF1a:N1080D, ORF1a:S2553F, Nigeria) with 25 seqs
5ed5059 - Cornelius Roemer, 2023-07-23 16:57:33 +0200 : Designate GA.5 (XBB.1.17.1.5, T23797C) with 200 seqs
188af0f - Cornelius Roemer, 2023-07-23 17:00:49 +0200 : Designate GA.6 (XBB.1.17.1.6, ORF1a:I2138V, G8785A, Ghana) with 150 seqs
bcd8f94 - Cornelius Roemer, 2023-07-23 17:02:15 +0200 : Designate GA.6.1 (XBB.1.17.1.6.1, S:478R, A19767G, C29642T) with 18 seqs
e27b040 - Cornelius Roemer, 2023-07-23 17:04:28 +0200 : Designate FW.3 (XBB.1.28.1.3, ORF1a:D2627N) with 40 seqs
d9b1567 - Cornelius Roemer, 2023-07-23 19:55:27 +0200 : Designate HD.1.1 (XBB.1.5.93.1.1, S:K356T, Dominican Republic) with 8 seqs
6c5de2e - Cornelius Roemer, 2023-07-23 19:57:43 +0200 : Designate FL.13.3 (XBB.1.9.1.13.3, T19110C) with 480 seqs
b51f6c4 - Cornelius Roemer, 2023-07-23 19:58:42 +0200 : Designate FL.13.3.1 (XBB.1.9.1.13.3.1, S:E154Q, England) with 90 seqs
6c38978 - Cornelius Roemer, 2023-07-23 20:00:19 +0200 : Designate FL.2.3.1 (XBB.1.9.1.2.3.1, S:K356T, China) with 7 seqs
ac1fcdc - Cornelius Roemer, 2023-07-23 20:02:53 +0200 : Designate XBB.1.16.17 (S:E554K) with 30 seqs
0aeb05b - Cornelius Roemer, 2023-07-23 20:06:24 +0200 : Designate FY.2.1 (S:A684V) with 75 seqs
063a961 - Cornelius Roemer, 2023-07-23 20:08:23 +0200 : Designate FY.4.1.1 (XBB.1.22.1.4.1.1, S:S704L) with 14 seqs
4504d16 - Cornelius Roemer, 2023-07-23 20:09:50 +0200 : Designate FY.7 (XBB.1.22.1.7, S:G769A, S:D1168E) with 7 seqs
382e492 - Cornelius Roemer, 2023-07-23 20:11:39 +0200 : Designate XBB.1.42.2 (C6040T, G9049A) with 500 seqs
284e1e5 - Cornelius Roemer, 2023-07-23 20:13:51 +0200 : Designate HL.1 (XBB.1.42.2.1, S:E583D) with 25 seqs
e0028e4 - Cornelius Roemer, 2023-07-23 20:14:58 +0200 : Designate HL.2 (XBB.1.42.2.2, S:S929N, China) with 10 seqs
84c9030 - Cornelius Roemer, 2023-07-23 20:17:52 +0200 : Designate HM.1 (XBB.1.5.30.1, S:N481K, Canada/Australia) with 50 seqs
b196c8a - Cornelius Roemer, 2023-07-23 20:20:46 +0200 : Designate FL.28 (XBB.1.9.1.28, S:K478R, ORF1a:S1520F, ORF3a:R68I, Spain) with 30 seqs
76918fd - Xu Zou, 2023-07-24 08:13:02 +0800 : Merge branch 'cov-lineages:master' into master
1a4e694 - HynnSpylor, 2023-07-24 11:26:30 +0800 : Update lineage_notes.txt
0bae7d2 - Federico Gueli, 2023-07-24 14:51:32 +0200 : Update lineage_notes.txt
798e525 - Federico Gueli, 2023-07-24 14:57:23 +0200 : Update lineage_notes.txt
a3def5f - Federico Gueli, 2023-07-24 15:02:19 +0200 : Update lineage_notes.txt
966d9d1 - Federico Gueli, 2023-07-24 15:06:35 +0200 : Update lineage_notes.txt
7b5fbd5 - Federico Gueli, 2023-07-24 15:12:14 +0200 : Update lineage_notes.txt
428e00c - Federico Gueli, 2023-07-24 15:16:52 +0200 : Update lineage_notes.txt
fe6f9b1 - Federico Gueli, 2023-07-24 15:26:16 +0200 : Update lineage_notes.txt
5a89fb0 - Federico Gueli, 2023-07-24 15:31:44 +0200 : Update lineage_notes.txt
f2f2355 - Federico Gueli, 2023-07-24 16:04:39 +0200 : Update lineage_notes.txt
c71b0f4 - Angie Hinrichs, 2023-07-24 12:49:25 -0700 : Merge pull request #2124 from HynnSpylor/patch-2
f1b813c - Angie Hinrichs, 2023-07-24 12:50:12 -0700 : Merge pull request #2123 from aviczhl2/master
2f165e4 - Angie Hinrichs, 2023-07-24 13:00:03 -0700 : Merge branch 'master' into patch-4
6f230b9 - Angie Hinrichs, 2023-07-24 13:03:50 -0700 : Merge pull request #2125 from FedeGueli/patch-4
d966878 - Angie Hinrichs, 2023-07-24 13:08:00 -0700 : Merge pull request #2126 from FedeGueli/patch-5
5641c1f - Angie Hinrichs, 2023-07-24 13:08:35 -0700 : Merge pull request #2127 from FedeGueli/patch-6
88242cf - Angie Hinrichs, 2023-07-24 13:09:15 -0700 : Merge pull request #2128 from FedeGueli/patch-7
6de5b35 - Angie Hinrichs, 2023-07-24 13:10:59 -0700 : Merge branch 'master' into patch-8
fafa6c0 - Angie Hinrichs, 2023-07-24 13:12:10 -0700 : Merge pull request #2129 from FedeGueli/patch-8
857a4b1 - Cornelius Roemer, 2023-07-24 22:11:30 +0200 : Designate XBB.1.5.97 (S:T941S, C7834T, New Zealand/Australia) with 500 seqs
eabb741 - Angie Hinrichs, 2023-07-24 13:14:22 -0700 : Merge branch 'master' into patch-9
613ab42 - Cornelius Roemer, 2023-07-24 22:15:07 +0200 : Designate EG.1.7 (XBB.1.9.2.1.7, S:E156V, Europe) with 75 seqs
13930b0 - Cornelius Roemer, 2023-07-24 22:17:37 +0200 : Designate EG.1.8 (S:S640F, ORF1b:D161G, ORF1b:P2321L, China) with 40 seqs
ddbe506 - Angie Hinrichs, 2023-07-24 13:21:04 -0700 : Merge pull request #2130 from FedeGueli/patch-9
7fd3739 - Cornelius Roemer, 2023-07-24 22:22:04 +0200 : Designate EG.4.4 (ORF1a:Y1465C, ORF1b:H873Y, Germany/Austria)
f619222 - Angie Hinrichs, 2023-07-24 13:28:28 -0700 : Merge pull request #2132 from FedeGueli/patch-11
f4374bb - Cornelius Roemer, 2023-07-24 22:28:49 +0200 : Designate FK.1.4.1 (S:G181A, Australia/Puerto Rico) with 34 seqs
9239925 - Cornelius Roemer, 2023-07-24 22:33:07 +0200 : Designate FK.1.1.2 (C9223T, T23071G, 700 seqs) and FK.1.1.1 (S:V445A, Australia, 20 seqs)
a1512d6 - Cornelius Roemer, 2023-07-24 22:37:54 +0200 : Designate HN.1 (FL.1.5.1.1, S:A67S, Dominican Republic) with 15 seqs
d6ce80d - Cornelius Roemer, 2023-07-24 22:40:49 +0200 : Designate FL.29 (S:490S, ORF1b:I2331V) with 200 seqs
a7ac99d - Angie Hinrichs, 2023-07-24 13:44:26 -0700 : Merge branch 'master' into patch-12
80327ff - Angie Hinrichs, 2023-07-24 13:46:39 -0700 : Merge pull request #2133 from FedeGueli/patch-12
fa6b8fd - Angie Hinrichs, 2023-07-24 13:47:16 -0700 : Merge pull request #2134 from FedeGueli/patch-13
ada6ac4 - Cornelius Roemer, 2023-07-24 22:48:42 +0200 : Designate EG.9 (S:403K, ORF1a:T1474I, ORF1b:N969S) with 48 seqs
12173ea - Cornelius Roemer, 2023-07-24 22:52:03 +0200 : Designate EG.9.1 (S:A344T, C13767T) with 30 seqs
4bbcc53 - Cornelius Roemer, 2023-07-24 22:53:48 +0200 : Designate EG.10 (S:A344T, S:R403K, Germany/Austria) with 30 seqs
5cc9938 - Cornelius Roemer, 2023-07-24 22:55:37 +0200 : Designate EG.10.1 (S:S494P, S:A701V) with 20 seqs
ae7a5de - Cornelius Roemer, 2023-07-25 18:23:19 +0200 : Designate DV.7.2 (C703T, England) with 50 seqs
5d45f7e - Cornelius Roemer, 2023-07-25 18:26:58 +0200 : Designate EG.5.2.1 (S:S704L, USA) with 30 seqs
6aeacc6 - Cornelius Roemer, 2023-07-25 18:28:40 +0200 : Designate EG.5.2.1 (XBB.1.9.2.5.2.2, ORF1b:T239I, China) with 40 seqs
4889ca7 - Cornelius Roemer, 2023-07-25 18:30:01 +0200 : Designate EG.5.2.3 (S:S704L, S:N1178D, Austria/USA) with 28 seqs
489cbbc - Cornelius Roemer, 2023-07-25 18:41:50 +0200 : Designate XBB.1.16.18 (ORF7a:T39I) with 450 seqs
662ead2 - Cornelius Roemer, 2023-07-25 18:43:30 +0200 : Designate XBB.1.16.19 (ORF1b:V839I) with 400 seqs
4f8dd09 - Cornelius Roemer, 2023-07-25 18:45:25 +0200 : Designate XBB.1.16.20 (ORF7b:S31L) with 200 seqs
77bccd6 - Cornelius Roemer, 2023-07-25 18:46:49 +0200 : Designate XBB.1.16.21 (ORF1a:V4072I) with 300 seqs
8174952 - Cornelius Roemer, 2023-07-25 18:47:57 +0200 : Designate XBB.1.16.22 (ORF3a:E242Q) with 300 seqs
095c247 - Cornelius Roemer, 2023-07-25 18:53:01 +0200 : Designate XBB.1.5.98 (S:E554K, ORF8:V32L, Ghana) with 100 seqs
e36678e - Cornelius Roemer, 2023-07-25 18:55:22 +0200 : Designate XBB.1.5.99 (S:E554K, ORF1a:T1168I, C823T, Ecuador) with 70 seqs
b4aa752 - Cornelius Roemer, 2023-07-26 11:34:47 +0200 : Designate HP.1 (XBB.1.5.55.1, N:L13F, US/Mexico, 50 seqs), HP.1.1 (S:478R, Mexico, 25 seqs)
8ecd6a4 - Cornelius Roemer, 2023-07-26 11:40:45 +0200 : Redesignate XBB.1.5.99 -> HQ.1 (XBB.1.5.92.1) as it is a sublineage
34eb52f - Cornelius Roemer, 2023-07-26 11:43:42 +0200 : Designate XBB.1.5.99 (ORF1a:V1122A, ORF1a:T2121I, Slovakia/Austria) with 500 seqs
4257140 - Cornelius Roemer, 2023-07-26 11:50:04 +0200 : Designate HR.1 (XBB.1.5.77.1, S:478R, N:I292V, Costa Rica/USA) with 30 seqs
158fe24 - Cornelius Roemer, 2023-07-26 12:05:24 +0200 : Designate HS.1 (XBB.1.5.95.1, S:478R, Mexico) with 80 seqs
c7e4f0a - Cornelius Roemer, 2023-07-26 12:52:22 +0200 : Designate HT.1 (XBB.1.5.49.1, S:148T, T4798C, Mexico) with 200 seqs
a9a549a - Cornelius Roemer, 2023-07-26 12:56:52 +0200 : Designate HT.2 (XBB.1.5.49.2, S:T51I) with 450 seqs
005e34f - Cornelius Roemer, 2023-07-26 15:23:08 +0200 : Designate XBB.1.19.2 (S:P521S, Pakistan) with 50 seqs
166dd74 - Cornelius Roemer, 2023-07-26 15:29:47 +0200 : Designate GW.5 (XBB.1.19.1.5, S:K478I, S:L455F, S:L456L, Pakistan) with 5 seqs
8cafcde - Cornelius Roemer, 2023-07-26 23:20:10 +0200 : Designate FL.20.1 (XBB.1.9.1.20.1, S:L455W, Northern Ireland/England, from #2145) with 11 seqs
c9178b3 - Cornelius Roemer, 2023-07-27 13:37:34 +0200 : Designate FL.21.1 (Alias of XBB.1.9.1.21, S:D1084N, South Korea, from #2143) with 100 seqs
5c44790 - Cornelius Roemer, 2023-07-27 13:42:05 +0200 : Designate FL.21.2 (ORF1a:V1019F, ORF1a:I2873M, China) with 160 seqs
1b21db9 - Cornelius Roemer, 2023-07-27 13:48:57 +0200 : Designate FT.3.1.1 (XBB.1.5.39.3.1.1, S:A348S, USA) with 30 seqs
1007720 - Cornelius Roemer, 2023-07-27 13:52:52 +0200 : Designate FL.19.1 (XBB.1.9.1.19.1, S:F456L (22928C), ORF1b:A1877V, Spain/Italy/Puerto Rico, from #2138) with 25 seqs
ec18a92 - Cornelius Roemer, 2023-07-27 13:55:17 +0200 : Update FL.19 defining mutations in lineage note
5083cb2 - Cornelius Roemer, 2023-07-27 13:58:43 +0200 : Designate FU.5 (XBB.1.16.1.5, S:K97E, ORF1a:R542C, Bangladesh, from #2137) with 50 seqs
3bcee93 - Cornelius Roemer, 2023-07-27 14:01:49 +0200 : Designate HU.1 (XBB.1.22.2.1, S:K529N) from #2136 with 50 seqs
8881481 - Cornelius Roemer, 2023-07-27 14:01:49 +0200 : Designate HU.1 (XBB.1.22.2.1, S:K529N) from #2136, and HU.2 (S:T76I, AUS/NZ)
502c1d1 - aviczhl2, 2023-07-28 12:15:32 +0800 : modified: automated-issue-ref.ipynb modified: autoref/milestone.txt modified: autoref/milestone_sub.txt modified: autoref/missing_refs.txt
8f55f43 - aviczhl2, 2023-07-28 12:16:13 +0800 : Add 2 refs from main page and 34 refs from sars_cov_2_variants page. modified: automated-issue-ref.ipynb
b55f642 - Angie Hinrichs, 2023-07-27 22:24:25 -0700 : Merge pull request #2149 from aviczhl2/master
7c88225 - Cornelius Roemer, 2023-07-28 16:06:59 +0200 : Designate FP.2.1.1 (XBB.1.11.1.2.1.1, S:L452Q, USA/Austria) with 11 seqs
9a8e528 - Cornelius Roemer, 2023-07-28 16:08:03 +0200 : Designate FP.2.1.2 (XBB.1.11.1.2.1.2, S:P521S, Indonesia) with 9 seqs
adeff5d - aviczhl2, 2023-07-29 20:04:04 +0800 : modified: automated-issue-ref.ipynb
fca3e2a - aviczhl2, 2023-07-29 20:11:22 +0800 : update automated-issue-ref.ipynb to adapt to the new manual ref format remove some duplicated autorefs in lineage_notes.txt
56e2b22 - Angie Hinrichs, 2023-07-29 22:42:06 -0700 : Merge pull request #2151 from aviczhl2/master
d1bdf0c - Xu Zou, 2023-07-30 16:55:15 +0800 : Manually add some ref issues w/o milestones
54284dc - Angie Hinrichs, 2023-07-31 10:13:41 -0700 : Merge pull request #2154 from aviczhl2/master
e4b8491 - Cornelius Roemer, 2023-08-01 13:10:03 +0200 : Add extra DV.7.1 designations
08aa9a8 - Cornelius Roemer, 2023-08-02 15:07:20 +0200 : Designate HV.1 (EG.5.1.6.1, S:L452R, USA) with 11 seqs
54d2bd4 - Cornelius Roemer, 2023-08-02 15:17:22 +0200 : Designate GK.3 (XBB.1.5.70.3, ORF1a:A876S, Brazil/USA/Canada, 30 seqs) and GK.3.1 (S:A475V, USA, 9 seqs)
6400aed - Cornelius Roemer, 2023-08-02 15:47:21 +0200 : Designate HW.1 (XBC.1.6.3.1, ORF1a:T1597I, ORF1a:A2123V, Australia) with 300 seqs
18ad1a9 - Cornelius Roemer, 2023-08-02 15:49:14 +0200 : Designate HW.1.1 (XBC.1.6.3.1.1, S:N460H, T16242A, C22120T, USA/Ireland) with 8 seqs
6655aae - Cornelius Roemer, 2023-08-02 18:53:56 +0200 : Designate XBB.1.5.100 (S:V1122M, USA/Mexico) with 350 seqs
8fceb45 - Cornelius Roemer, 2023-08-02 18:55:20 +0200 : Designate HY.1 (XBB.1.5.100.1, S:478R, US/Mexico) with 60 seqs
181f689 - Cornelius Roemer, 2023-08-04 13:34:41 +0200 : Fix alias error for HY, should be XBB.1.5.100 not XBC.1.5.100
9326c3a - Cornelius Roemer, 2023-08-04 13:42:20 +0200 : Designate GJ.1.2.1 (XBB.2.3.3.1.2.1, S:N450D, Singapore/Thailand/South Korea/USA/Spain) with 8 seqs
bdb0eef - Cornelius Roemer, 2023-08-04 13:57:45 +0200 : Designate HZ.1 (XBB.1.5.68.1, S:K478R, USA, 150 seqs), HZ.2 (ORF1a:H3580Y), HZ.3 (ORF1a:I3693T)
6a9f99c - TheZetner, 2023-08-04 12:12:16 -0500 : Update lineage_notes.txt
371da2d - aviczhl2, 2023-08-06 11:52:24 +0800 : add 9 autorefs to lineage_notes.txt
474bd0d - Cornelius Roemer, 2023-08-06 21:42:54 +0200 : Designate BN.1.3.13 (S:V445A, C3817T, C17818T, Taiwan/Japan/South Korea) with 50 seqs
4bd8a9f - Xu Zou, 2023-08-07 14:51:35 +0800 : Merge branch 'cov-lineages:master' into master
77da1fd - Cornelius Roemer, 2023-08-07 21:07:24 +0200 : Designate EG.11 (XBB.1.9.2.11, S:E554K, A26319G, Malaysia) with 40 seqs
e200aa8 - Cornelius Roemer, 2023-08-07 21:11:18 +0200 : Designate GY.8 (XBB.1.16.2.8, S:F456L, C25452T, Japan) with 20 seqs
84bc981 - Cornelius Roemer, 2023-08-07 21:18:49 +0200 : Designate FY.4.2 (XBB.1.22.1.4.2, ORF1a:Y2171F, ORF1b:V2287I, Kenya/USA/Japan) with 30 seqs
5023ce7 - Cornelius Roemer, 2023-08-07 21:22:51 +0200 : Designate XBB.1.22.3 (ORF1a:P3504L, ORF1b:H1838N, Japan) with 50 seqs
bcbbeb7 - Cornelius Roemer, 2023-08-07 21:25:32 +0200 : Designate HU.1.1 (XBB.1.22.2.1.1, S:E471Q, S:Y28H, France/USA) with 30 seqs
9aa524b - Cornelius Roemer, 2023-08-07 21:39:49 +0200 : Extra GJ.1, GJ.1.1, GJ.1.2 designations
475852b - Cornelius Roemer, 2023-08-07 21:41:23 +0200 : Designate GJ.4 (XBB.2.3.3.4, S:M153I) with 100 seqs
371afbe - Cornelius Roemer, 2023-08-07 21:49:59 +0200 : Designate XBB.1.5.101 (ORF7a:E3Q, C14877T, Scandinavia/Poland/Vietnam) with 150 seqs
e0f64b2 - Cornelius Roemer, 2023-08-07 21:58:31 +0200 : Designate FL.2.5 ( S:Q314E) with 90 seqs
ade6b5d - Cornelius Roemer, 2023-08-07 22:01:29 +0200 : Designate EG.12 (XBB.1.9.2.12, S:E554K, N:R195T, ORF1a:T4159I, Oman/Austria/Brunei/India) with 30 seqs
c548c8f - Federico Gueli, 2023-08-08 16:02:15 +0200 : Update lineage_notes.txt
df90568 - ciscorucinski, 2023-08-10 02:09:34 +0900 : Added new workflow to analyze lineage notes
e69140d - ciscorucinski, 2023-08-10 02:13:50 +0900 : Added new workflow to analyze lineage notes
86446a2 - ciscorucinski, 2023-08-10 02:15:23 +0900 : Added new workflow to analyze lineage notes
087b0c7 - ciscorucinski, 2023-08-10 02:23:43 +0900 : Added new workflow to analyze lineage notes
972aff8 - ciscorucinski, 2023-08-10 02:25:25 +0900 : Added new workflow to analyze lineage notes
31b00bb - Christopher Rucinski, 2023-08-10 02:38:20 +0900 : Merge pull request #1 from ciscorucinski/feature/workflow/lineage_notes
5fdf92b - Memorable, 2023-08-10 11:57:03 +0800 : Update lineage_notes.txt
bae36e6 - Cornelius Roemer, 2023-08-10 15:53:01 +0200 : Designate JA.1 (XBB.2.3.13.1, S:F456L (T22928C), Spain/England/France, 30 seqs)
dff1a9f - Cornelius Roemer, 2023-08-10 15:57:31 +0200 : Designate JB.1 (XBB.1.5.53.1, S:N148T, South Africa, 20 seqs)
98c95b7 - Cornelius Roemer, 2023-08-10 15:58:51 +0200 : Designate JB.2 (XBB.1.5.53.2, S:K478R, South Africa/USA) with 12 seqs
3177d1b - Xu Zou, 2023-08-11 15:41:19 +0800 : Merge branch 'master' into master
fbac1b3 - Angie Hinrichs, 2023-08-15 11:00:18 -0700 : Merge pull request #2163 from TheZetner/master
026c92d - Angie Hinrichs, 2023-08-15 11:02:32 -0700 : Merge branch 'master' into master
9c25d05 - Angie Hinrichs, 2023-08-15 11:07:16 -0700 : Merge pull request #2167 from aviczhl2/master
ea4b74e - Angie Hinrichs, 2023-08-15 11:11:56 -0700 : Merge pull request #2175 from FedeGueli/master-1
a2893cb - Angie Hinrichs, 2023-08-15 11:16:11 -0700 : Merge pull request #2177 from ciscorucinski/master
bb72661 - Angie Hinrichs, 2023-08-15 11:18:54 -0700 : Merge pull request #2179 from Memorablea/master-1
c5c340c - Cornelius Roemer, 2023-08-17 17:19:18 +0200 : Designate BA.2.86 with 4 sequences
6e3c06a - Angie Hinrichs, 2023-08-17 14:31:11 -0700 : Removing C823T from description of XBB.1.5.92 because not all sequences with ORF1a:T1168I have C823T (none of the designated sequences do). refs #2146

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