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DeepVariant preset config (v1) for WGS and WES #190

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merged 3 commits into from
Oct 20, 2019

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tedyun
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@tedyun tedyun commented Oct 18, 2019

Hi Mike,

This PR adds two new presets for merging DeepVariant gVCFs: DeepVariantWGS and DeepVariantWES. I made the old DeepVariant preset basically an alias of DeepVariantWGS for backwards compatibility, for users who were already using the experimental version (please let me know if there's a way of programmatically set this as an alias instead of copying the config).

Please take a look. Thank you!

Best,
Ted

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Coverage Status

Coverage increased (+0.02%) to 93.404% when pulling 05c83cf on tedyun:tedyun-deepvariant-config into 3dd619e on dnanexus-rnd:master.

@mlin
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mlin commented Oct 20, 2019

A ♥️ A ♦️

@mlin mlin merged commit 45adda5 into dnanexus-rnd:master Oct 20, 2019
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3 participants