- freebayes 108 Bayesian haplotype-based polymorphism discovery and genotyping.
- vcflib 93 a simple C++ library for parsing and manipulating VCF files, + many command-line utilities
- vg 45 tools for working with variant graphs
- intervaltree 37 a minimal C++ interval tree implementation
Repositories contributed to
- maxogden/dat 3,427 real-time replication and versioning for data sets.
- facebook/rocksdb 3,253 A library that provides an embeddable, persistent key-value store for fast storage.
- jewmanchue/wham 18 Structural variant detection and association testing
- doches/progressbar 12 An easy-to-use C library for displaying text progress bars.
- mafintosh/hyperlog 36 Merkle DAG that replicates based on scuttlebutt logs and causal linking
Contributions in the last year 850 total Mar 30, 2014 – Mar 30, 2015
Longest streak 54 days November 24 – January 16
Current streak 0 days Last contributed