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  1. vgteam/vg Public

    tools for working with genome variation graphs

    C++ 850 168

  2. base-accurate DNA sequence alignments using WFA and mashmap2

    C++ 99 7

  3. the pangenome graph builder

    Shell 203 20

  4. seqwish Public

    alignment to variation graph inducer

    C++ 105 11

  5. linearize and simplify variation graphs using blocked partial order alignment

    C++ 35 6

  6. Bayesian haplotype-based genetic polymorphism discovery and genotyping.

    C++ 625 249

1,161 contributions in the last year

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep Mon Wed Fri

Contribution activity

September 2022

Opened 2 pull requests in 1 repository

Created an issue in BridgeTheMasterBuilder/thue that received 1 comment


Would it make sense for only the order of application the production rules to be randomized? As in, at each rewrite step we sample a production rul…

1 comment
Opened 1 other issue in 1 repository
DRL/blobtools 1 open

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