Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Add option to accumulate observations #534

Merged
merged 18 commits into from
Feb 15, 2024
Merged

Add option to accumulate observations #534

merged 18 commits into from
Feb 15, 2024

Commits on Feb 15, 2024

  1. add option to accumulate observations

    @sbfnk
    sbfnk committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    59ad588 View commit details
    Browse the repository at this point in the history

  2. accumulate in estimate_secondary model

    @sbfnk
    sbfnk committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    0eab176 View commit details
    Browse the repository at this point in the history

  3. add test for weekly accumulation

    @sbfnk
    sbfnk committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    7490532 View commit details
    Browse the repository at this point in the history

  4. check there's data to fit initial growth model

    @sbfnk
    sbfnk committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    87281b2 View commit details
    Browse the repository at this point in the history

  5. ignore first observation when accumulating

    @sbfnk
    sbfnk committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    92faf5f View commit details
    Browse the repository at this point in the history

  6. document "na" argument

    @sbfnk
    sbfnk committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    ed9d636 View commit details
    Browse the repository at this point in the history

  7. add news item

    @sbfnk
    sbfnk committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    464fa20 View commit details
    Browse the repository at this point in the history

  8. update obs_opts tests

    @sbfnk
    sbfnk committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    34c38ba View commit details
    Browse the repository at this point in the history

  9. make logical operator scalar

    @sbfnk
    sbfnk committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    21d3f2d View commit details
    Browse the repository at this point in the history

  10. make NA option work with estimate_secondary

    @sbfnk
    sbfnk committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    b091be9 View commit details
    Browse the repository at this point in the history

  11. add tests

    @sbfnk
    sbfnk committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    2c64fb5 View commit details
    Browse the repository at this point in the history

  12. Apply suggestions from code review 

    Co-authored-by: Sam Abbott <s.e.abbott12@gmail.com>
    @sbfnk @seabbs
    sbfnk and seabbs committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    3f3d819 View commit details
    Browse the repository at this point in the history

  13. make documentation consistent

    @sbfnk
    sbfnk committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    f67cfca View commit details
    Browse the repository at this point in the history

  14. no need to re-specify values

    @sbfnk
    sbfnk committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    d6531ef View commit details
    Browse the repository at this point in the history

  15. re-render obs_opts documentation

    @sbfnk
    sbfnk committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    16e1122 View commit details
    Browse the repository at this point in the history

  16. add message when accumulating (and update doc)

    @sbfnk
    sbfnk committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    3f7fdbb View commit details
    Browse the repository at this point in the history

  17. fix typo

    @sbfnk
    sbfnk committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    62433ed View commit details
    Browse the repository at this point in the history

  18. fix test issues after rebase

    @sbfnk
    sbfnk committed Feb 15, 2024
    Configuration menu
    Copy the full SHA
    09e2c3c View commit details
    Browse the repository at this point in the history