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Volcano plots: raw p-value plots #5

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3 tasks done
sreichl opened this issue Jul 27, 2023 · 0 comments
Closed
3 tasks done

Volcano plots: raw p-value plots #5

sreichl opened this issue Jul 27, 2023 · 0 comments
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enhancement New feature or request

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@sreichl
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sreichl commented Jul 27, 2023

  • add raw p-values, but still colored according to config on adjusted p-values
  • indicate below that absolute LFC being used by e.g., |log2FC| > 1
  • remove duplicate legend entries (probably fix by adding something like drop=FALSE during plotting)

like here: https://github.com/epigen/dea_limma/blob/4b31eaf3de1beb4199245084b48ee466955a4520/workflow/scripts/volcanos.R

@sreichl sreichl added the enhancement New feature or request label Jul 27, 2023
@sreichl sreichl self-assigned this Jul 27, 2023
@sreichl sreichl closed this as completed Feb 20, 2024
sreichl added a commit that referenced this issue Feb 20, 2024
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