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TestRestartRemoved: got error context deadline exceeded #7739

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heyitsanthony opened this issue Apr 14, 2017 · 2 comments
Closed

TestRestartRemoved: got error context deadline exceeded #7739

heyitsanthony opened this issue Apr 14, 2017 · 2 comments
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@heyitsanthony
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via https://semaphoreci.com/coreos/etcd/branches/master/builds/1804

--- FAIL: TestRestartRemoved (46.81s)
	cluster_test.go:469: expected to remove member, got error context deadline exceeded
@gyuho
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gyuho commented Apr 14, 2017

Yeah seems related to my config-apply change.

Similar failure

--- FAIL: TestRestartMember (70.64s)
	cluster_test.go:521: #2: watch on unix://127.0.0.1:2273023639 error: context deadline exceeded

@gyuho gyuho self-assigned this Apr 14, 2017
@heyitsanthony heyitsanthony added this to the v3.2.0 milestone Apr 20, 2017
gyuho added a commit to gyuho/etcd that referenced this issue Apr 25, 2017
Problem is:

`Step1`: `etcdserver/raft.go`'s `Ready` process routine sends config-change entries via `r.applyc <- ap` (https://github.com/coreos/etcd/blob/master/etcdserver/raft.go#L193-L203)

`Step2`: `etcdserver/server.go`s `*EtcdServer.run` routine receives this via `ap := <-s.r.apply()` (https://github.com/coreos/etcd/blob/master/etcdserver/server.go#L735-L738)

`StepA`: `Step1` proceeds without sync, right after sending `r.applyc <- ap`.

`StepB`: `Step2` proceeds without sync, right after `sched.Schedule(s.applyAll(&ep,&ap))`.

`StepC`: `etcdserver` tries to sync with `s.applyAll(&ep,&ap)` by calling `rh.waitForApply()`.

`rh.waitForApply()` waits for all pending jobs to finish in `pkg/schedule`
side. However, the order of `StepA`,`StepB`,`StepC` is not guaranteed. It
is possible that `StepC` happens first, and proceeds without waiting on
apply. And the restarting member comes back as a leader in single-node
cluster, when there is no synchronization between apply-layer and
config-change Raft entry apply. Confirmed with more debugging lines below,
only reproducible with slow CPU VM (~2 vCPU).

```
~:24.005397 I | etcdserver: starting server... [version: 3.2.0+git, cluster version: to_be_decided]
~:24.011136 I | etcdserver: [DEBUG] 29b2d24047a277df waitForApply before
~:24.011194 I | etcdserver: [DEBUG] 29b2d24047a277df starts wait for 0 pending jobs
~:24.011234 I | etcdserver: [DEBUG] 29b2d24047a277df finished wait for 0 pending jobs (current pending 0)
~:24.011268 I | etcdserver: [DEBUG] 29b2d24047a277df waitForApply after
~:24.011348 I | etcdserver: [DEBUG] [0] 29b2d24047a277df is scheduling conf change on 29b2d24047a277df
~:24.011396 I | etcdserver: [DEBUG] [1] 29b2d24047a277df is scheduling conf change on 5edf80e32a334cf0
~:24.011437 I | etcdserver: [DEBUG] [2] 29b2d24047a277df is scheduling conf change on e32e31e76c8d2678
~:24.011477 I | etcdserver: [DEBUG] 29b2d24047a277df scheduled conf change on 29b2d24047a277df
~:24.011509 I | etcdserver: [DEBUG] 29b2d24047a277df scheduled conf change on 5edf80e32a334cf0
~:24.011545 I | etcdserver: [DEBUG] 29b2d24047a277df scheduled conf change on e32e31e76c8d2678
~:24.012500 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 29b2d24047a277df before
~:24.013014 I | etcdserver/membership: added member 29b2d24047a277df [unix://127.0.0.1:2100515039] to cluster 9250d4ae34216949
~:24.013066 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 29b2d24047a277df after
~:24.013113 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 29b2d24047a277df after trigger
~:24.013158 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 5edf80e32a334cf0 before
~:24.013666 W | etcdserver: failed to send out heartbeat on time (exceeded the 10ms timeout for 11.964739ms)
~:24.013709 W | etcdserver: server is likely overloaded
~:24.013750 W | etcdserver: failed to send out heartbeat on time (exceeded the 10ms timeout for 12.057265ms)
~:24.013775 W | etcdserver: server is likely overloaded
~:24.013950 I | raft: 29b2d24047a277df is starting a new election at term 4
~:24.014012 I | raft: 29b2d24047a277df became candidate at term 5
~:24.014051 I | raft: 29b2d24047a277df received MsgVoteResp from 29b2d24047a277df at term 5
~:24.014107 I | raft: 29b2d24047a277df became leader at term 5
~:24.014146 I | raft: raft.node: 29b2d24047a277df elected leader 29b2d24047a277df at term 5
```

I am printing out the number of pending jobs before we call
`sched.WaitFinish(0)`, and there was no pending jobs, so it returned
immediately (before we schedule `applyAll`).

This is the root cause to:

- etcd-io#7595
- etcd-io#7739
- etcd-io#7802

`sched.WaitFinish(0)` doesn't work when `len(f.pendings)==0` and
`f.finished==0`. Config-change is the first job to apply, so
`f.finished` is 0 in this case.

`f.finished` monotonically increases, so we need `WaitFinish(finished+1)`.
And `finished` must be the one before calling `Schedule`. This is safe
because `Schedule(applyAll)` is the only place adding jobs to `sched`.

This patch ensures scheduler waits on the single job of `applyAll`,
by getting the current number of finished jobs before sending `Schedule`.

Confirmed that it fixes the issue, as below:

```
~:43.198354 I | rafthttp: started streaming with peer 36cda5222aba364b (stream MsgApp v2 reader)
~:43.198740 I | etcdserver: [DEBUG] 3988bc20c2b2e40c waitForApply before
~:43.198836 I | etcdserver: [DEBUG] 3988bc20c2b2e40c starts wait for 0 pending jobs, 1 finished jobs
~:43.200696 I | integration: launched 3169361310155633349 ()
~:43.201784 I | etcdserver: [DEBUG] [0] 3988bc20c2b2e40c is scheduling conf change on 36cda5222aba364b
~:43.201884 I | etcdserver: [DEBUG] [1] 3988bc20c2b2e40c is scheduling conf change on 3988bc20c2b2e40c
~:43.201965 I | etcdserver: [DEBUG] [2] 3988bc20c2b2e40c is scheduling conf change on cf5d6cbc2a121727
~:43.202070 I | etcdserver: [DEBUG] 3988bc20c2b2e40c scheduled conf change on 36cda5222aba364b
~:43.202139 I | etcdserver: [DEBUG] 3988bc20c2b2e40c scheduled conf change on 3988bc20c2b2e40c
~:43.202204 I | etcdserver: [DEBUG] 3988bc20c2b2e40c scheduled conf change on cf5d6cbc2a121727
~:43.202444 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 36cda5222aba364b (request ID: 0) before
~:43.204486 I | etcdserver/membership: added member 36cda5222aba364b [unix://127.0.0.1:2100913646] to cluster 425d73f1b7b01674
~:43.204588 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 36cda5222aba364b (request ID: 0) after
~:43.204703 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 36cda5222aba364b (request ID: 0) after trigger
~:43.204791 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 3988bc20c2b2e40c (request ID: 0) before
~:43.205689 I | etcdserver/membership: added member 3988bc20c2b2e40c [unix://127.0.0.1:2101113646] to cluster 425d73f1b7b01674
~:43.205783 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 3988bc20c2b2e40c (request ID: 0) after
~:43.205929 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 3988bc20c2b2e40c (request ID: 0) after trigger
~:43.206056 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on cf5d6cbc2a121727 (request ID: 0) before
~:43.207353 I | etcdserver/membership: added member cf5d6cbc2a121727 [unix://127.0.0.1:2100713646] to cluster 425d73f1b7b01674
~:43.207516 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on cf5d6cbc2a121727 (request ID: 0) after
~:43.207619 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on cf5d6cbc2a121727 (request ID: 0) after trigger
~:43.207710 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished scheduled conf change on 36cda5222aba364b
~:43.207781 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished scheduled conf change on 3988bc20c2b2e40c
~:43.207843 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished scheduled conf change on cf5d6cbc2a121727
~:43.207951 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished wait for 0 pending jobs (current pending 0, finished 1)
~:43.208029 I | rafthttp: started HTTP pipelining with peer cf5d6cbc2a121727
~:43.210339 I | rafthttp: peer 3988bc20c2b2e40c became active
~:43.210435 I | rafthttp: established a TCP streaming connection with peer 3988bc20c2b2e40c (stream MsgApp v2 reader)
~:43.210861 I | rafthttp: started streaming with peer 3988bc20c2b2e40c (writer)
~:43.211732 I | etcdserver: [DEBUG] 3988bc20c2b2e40c waitForApply after
```

Signed-off-by: Gyu-Ho Lee <gyuhox@gmail.com>
gyuho added a commit to gyuho/etcd that referenced this issue Apr 25, 2017
Problem is:

`Step1`: `etcdserver/raft.go`'s `Ready` process routine sends config-change entries via `r.applyc <- ap` (https://github.com/coreos/etcd/blob/master/etcdserver/raft.go#L193-L203)

`Step2`: `etcdserver/server.go`'s `*EtcdServer.run` routine receives this via `ap := <-s.r.apply()` (https://github.com/coreos/etcd/blob/master/etcdserver/server.go#L735-L738)

`StepA`: `Step1` proceeds without sync, right after sending `r.applyc <- ap`.

`StepB`: `Step2` proceeds without sync, right after `sched.Schedule(s.applyAll(&ep,&ap))`.

`StepC`: `etcdserver` tries to sync with `s.applyAll(&ep,&ap)` by calling `rh.waitForApply()`.

`rh.waitForApply()` waits for all pending jobs to finish in `pkg/schedule`
side. However, the order of `StepA`,`StepB`,`StepC` is not guaranteed. It
is possible that `StepC` happens first, and proceeds without waiting on
apply. And the restarting member comes back as a leader in single-node
cluster, when there is no synchronization between apply-layer and
config-change Raft entry apply. Confirmed with more debugging lines below,
only reproducible with slow CPU VM (~2 vCPU).

```
~:24.005397 I | etcdserver: starting server... [version: 3.2.0+git, cluster version: to_be_decided]
~:24.011136 I | etcdserver: [DEBUG] 29b2d24047a277df waitForApply before
~:24.011194 I | etcdserver: [DEBUG] 29b2d24047a277df starts wait for 0 pending jobs
~:24.011234 I | etcdserver: [DEBUG] 29b2d24047a277df finished wait for 0 pending jobs (current pending 0)
~:24.011268 I | etcdserver: [DEBUG] 29b2d24047a277df waitForApply after
~:24.011348 I | etcdserver: [DEBUG] [0] 29b2d24047a277df is scheduling conf change on 29b2d24047a277df
~:24.011396 I | etcdserver: [DEBUG] [1] 29b2d24047a277df is scheduling conf change on 5edf80e32a334cf0
~:24.011437 I | etcdserver: [DEBUG] [2] 29b2d24047a277df is scheduling conf change on e32e31e76c8d2678
~:24.011477 I | etcdserver: [DEBUG] 29b2d24047a277df scheduled conf change on 29b2d24047a277df
~:24.011509 I | etcdserver: [DEBUG] 29b2d24047a277df scheduled conf change on 5edf80e32a334cf0
~:24.011545 I | etcdserver: [DEBUG] 29b2d24047a277df scheduled conf change on e32e31e76c8d2678
~:24.012500 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 29b2d24047a277df before
~:24.013014 I | etcdserver/membership: added member 29b2d24047a277df [unix://127.0.0.1:2100515039] to cluster 9250d4ae34216949
~:24.013066 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 29b2d24047a277df after
~:24.013113 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 29b2d24047a277df after trigger
~:24.013158 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 5edf80e32a334cf0 before
~:24.013666 W | etcdserver: failed to send out heartbeat on time (exceeded the 10ms timeout for 11.964739ms)
~:24.013709 W | etcdserver: server is likely overloaded
~:24.013750 W | etcdserver: failed to send out heartbeat on time (exceeded the 10ms timeout for 12.057265ms)
~:24.013775 W | etcdserver: server is likely overloaded
~:24.013950 I | raft: 29b2d24047a277df is starting a new election at term 4
~:24.014012 I | raft: 29b2d24047a277df became candidate at term 5
~:24.014051 I | raft: 29b2d24047a277df received MsgVoteResp from 29b2d24047a277df at term 5
~:24.014107 I | raft: 29b2d24047a277df became leader at term 5
~:24.014146 I | raft: raft.node: 29b2d24047a277df elected leader 29b2d24047a277df at term 5
```

I am printing out the number of pending jobs before we call
`sched.WaitFinish(0)`, and there was no pending jobs, so it returned
immediately (before we schedule `applyAll`).

This is the root cause to:

- etcd-io#7595
- etcd-io#7739
- etcd-io#7802

`sched.WaitFinish(0)` doesn't work when `len(f.pendings)==0` and
`f.finished==0`. Config-change is the first job to apply, so
`f.finished` is 0 in this case.

`f.finished` monotonically increases, so we need `WaitFinish(finished+1)`.
And `finished` must be the one before calling `Schedule`. This is safe
because `Schedule(applyAll)` is the only place adding jobs to `sched`.

This patch ensures scheduler waits on the single job of `applyAll`,
by getting the current number of finished jobs before sending `Schedule`.

Confirmed that it fixes the issue, as below:

```
~:43.198354 I | rafthttp: started streaming with peer 36cda5222aba364b (stream MsgApp v2 reader)
~:43.198740 I | etcdserver: [DEBUG] 3988bc20c2b2e40c waitForApply before
~:43.198836 I | etcdserver: [DEBUG] 3988bc20c2b2e40c starts wait for 0 pending jobs, 1 finished jobs
~:43.200696 I | integration: launched 3169361310155633349 ()
~:43.201784 I | etcdserver: [DEBUG] [0] 3988bc20c2b2e40c is scheduling conf change on 36cda5222aba364b
~:43.201884 I | etcdserver: [DEBUG] [1] 3988bc20c2b2e40c is scheduling conf change on 3988bc20c2b2e40c
~:43.201965 I | etcdserver: [DEBUG] [2] 3988bc20c2b2e40c is scheduling conf change on cf5d6cbc2a121727
~:43.202070 I | etcdserver: [DEBUG] 3988bc20c2b2e40c scheduled conf change on 36cda5222aba364b
~:43.202139 I | etcdserver: [DEBUG] 3988bc20c2b2e40c scheduled conf change on 3988bc20c2b2e40c
~:43.202204 I | etcdserver: [DEBUG] 3988bc20c2b2e40c scheduled conf change on cf5d6cbc2a121727
~:43.202444 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 36cda5222aba364b (request ID: 0) before
~:43.204486 I | etcdserver/membership: added member 36cda5222aba364b [unix://127.0.0.1:2100913646] to cluster 425d73f1b7b01674
~:43.204588 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 36cda5222aba364b (request ID: 0) after
~:43.204703 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 36cda5222aba364b (request ID: 0) after trigger
~:43.204791 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 3988bc20c2b2e40c (request ID: 0) before
~:43.205689 I | etcdserver/membership: added member 3988bc20c2b2e40c [unix://127.0.0.1:2101113646] to cluster 425d73f1b7b01674
~:43.205783 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 3988bc20c2b2e40c (request ID: 0) after
~:43.205929 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 3988bc20c2b2e40c (request ID: 0) after trigger
~:43.206056 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on cf5d6cbc2a121727 (request ID: 0) before
~:43.207353 I | etcdserver/membership: added member cf5d6cbc2a121727 [unix://127.0.0.1:2100713646] to cluster 425d73f1b7b01674
~:43.207516 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on cf5d6cbc2a121727 (request ID: 0) after
~:43.207619 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on cf5d6cbc2a121727 (request ID: 0) after trigger
~:43.207710 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished scheduled conf change on 36cda5222aba364b
~:43.207781 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished scheduled conf change on 3988bc20c2b2e40c
~:43.207843 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished scheduled conf change on cf5d6cbc2a121727
~:43.207951 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished wait for 0 pending jobs (current pending 0, finished 1)
~:43.208029 I | rafthttp: started HTTP pipelining with peer cf5d6cbc2a121727
~:43.210339 I | rafthttp: peer 3988bc20c2b2e40c became active
~:43.210435 I | rafthttp: established a TCP streaming connection with peer 3988bc20c2b2e40c (stream MsgApp v2 reader)
~:43.210861 I | rafthttp: started streaming with peer 3988bc20c2b2e40c (writer)
~:43.211732 I | etcdserver: [DEBUG] 3988bc20c2b2e40c waitForApply after
```

Signed-off-by: Gyu-Ho Lee <gyuhox@gmail.com>
gyuho added a commit to gyuho/etcd that referenced this issue Apr 25, 2017
Problem is:

`Step1`: `etcdserver/raft.go`'s `Ready` process routine sends config-change entries via `r.applyc <- ap` (https://github.com/coreos/etcd/blob/master/etcdserver/raft.go#L193-L203)

`Step2`: `etcdserver/server.go`'s `*EtcdServer.run` routine receives this via `ap := <-s.r.apply()` (https://github.com/coreos/etcd/blob/master/etcdserver/server.go#L735-L738)

`StepA`: `Step1` proceeds without sync, right after sending `r.applyc <- ap`.

`StepB`: `Step2` proceeds without sync, right after `sched.Schedule(s.applyAll(&ep,&ap))`.

`StepC`: `etcdserver` tries to sync with `s.applyAll(&ep,&ap)` by calling `rh.waitForApply()`.

`rh.waitForApply()` waits for all pending jobs to finish in `pkg/schedule`
side. However, the order of `StepA`,`StepB`,`StepC` is not guaranteed. It
is possible that `StepC` happens first, and proceeds without waiting on
apply. And the restarting member comes back as a leader in single-node
cluster, when there is no synchronization between apply-layer and
config-change Raft entry apply. Confirmed with more debugging lines below,
only reproducible with slow CPU VM (~2 vCPU).

```
~:24.005397 I | etcdserver: starting server... [version: 3.2.0+git, cluster version: to_be_decided]
~:24.011136 I | etcdserver: [DEBUG] 29b2d24047a277df waitForApply before
~:24.011194 I | etcdserver: [DEBUG] 29b2d24047a277df starts wait for 0 pending jobs
~:24.011234 I | etcdserver: [DEBUG] 29b2d24047a277df finished wait for 0 pending jobs (current pending 0)
~:24.011268 I | etcdserver: [DEBUG] 29b2d24047a277df waitForApply after
~:24.011348 I | etcdserver: [DEBUG] [0] 29b2d24047a277df is scheduling conf change on 29b2d24047a277df
~:24.011396 I | etcdserver: [DEBUG] [1] 29b2d24047a277df is scheduling conf change on 5edf80e32a334cf0
~:24.011437 I | etcdserver: [DEBUG] [2] 29b2d24047a277df is scheduling conf change on e32e31e76c8d2678
~:24.011477 I | etcdserver: [DEBUG] 29b2d24047a277df scheduled conf change on 29b2d24047a277df
~:24.011509 I | etcdserver: [DEBUG] 29b2d24047a277df scheduled conf change on 5edf80e32a334cf0
~:24.011545 I | etcdserver: [DEBUG] 29b2d24047a277df scheduled conf change on e32e31e76c8d2678
~:24.012500 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 29b2d24047a277df before
~:24.013014 I | etcdserver/membership: added member 29b2d24047a277df [unix://127.0.0.1:2100515039] to cluster 9250d4ae34216949
~:24.013066 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 29b2d24047a277df after
~:24.013113 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 29b2d24047a277df after trigger
~:24.013158 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 5edf80e32a334cf0 before
~:24.013666 W | etcdserver: failed to send out heartbeat on time (exceeded the 10ms timeout for 11.964739ms)
~:24.013709 W | etcdserver: server is likely overloaded
~:24.013750 W | etcdserver: failed to send out heartbeat on time (exceeded the 10ms timeout for 12.057265ms)
~:24.013775 W | etcdserver: server is likely overloaded
~:24.013950 I | raft: 29b2d24047a277df is starting a new election at term 4
~:24.014012 I | raft: 29b2d24047a277df became candidate at term 5
~:24.014051 I | raft: 29b2d24047a277df received MsgVoteResp from 29b2d24047a277df at term 5
~:24.014107 I | raft: 29b2d24047a277df became leader at term 5
~:24.014146 I | raft: raft.node: 29b2d24047a277df elected leader 29b2d24047a277df at term 5
```

I am printing out the number of pending jobs before we call
`sched.WaitFinish(0)`, and there was no pending jobs, so it returned
immediately (before we schedule `applyAll`).

This is the root cause to:

- etcd-io#7595
- etcd-io#7739
- etcd-io#7802

`sched.WaitFinish(0)` doesn't work when `len(f.pendings)==0` and
`f.finished==0`. Config-change is the first job to apply, so
`f.finished` is 0 in this case.

`f.finished` monotonically increases, so we need `WaitFinish(finished+1)`.
And `finished` must be the one before calling `Schedule`. This is safe
because `Schedule(applyAll)` is the only place adding jobs to `sched`.

This patch ensures scheduler waits on the single job of `applyAll`,
by getting the current number of finished jobs before sending `Schedule`.

Confirmed that it fixes the issue, as below:

```
~:43.198354 I | rafthttp: started streaming with peer 36cda5222aba364b (stream MsgApp v2 reader)
~:43.198740 I | etcdserver: [DEBUG] 3988bc20c2b2e40c waitForApply before
~:43.198836 I | etcdserver: [DEBUG] 3988bc20c2b2e40c starts wait for 0 pending jobs, 1 finished jobs
~:43.200696 I | integration: launched 3169361310155633349 ()
~:43.201784 I | etcdserver: [DEBUG] [0] 3988bc20c2b2e40c is scheduling conf change on 36cda5222aba364b
~:43.201884 I | etcdserver: [DEBUG] [1] 3988bc20c2b2e40c is scheduling conf change on 3988bc20c2b2e40c
~:43.201965 I | etcdserver: [DEBUG] [2] 3988bc20c2b2e40c is scheduling conf change on cf5d6cbc2a121727
~:43.202070 I | etcdserver: [DEBUG] 3988bc20c2b2e40c scheduled conf change on 36cda5222aba364b
~:43.202139 I | etcdserver: [DEBUG] 3988bc20c2b2e40c scheduled conf change on 3988bc20c2b2e40c
~:43.202204 I | etcdserver: [DEBUG] 3988bc20c2b2e40c scheduled conf change on cf5d6cbc2a121727
~:43.202444 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 36cda5222aba364b (request ID: 0) before
~:43.204486 I | etcdserver/membership: added member 36cda5222aba364b [unix://127.0.0.1:2100913646] to cluster 425d73f1b7b01674
~:43.204588 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 36cda5222aba364b (request ID: 0) after
~:43.204703 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 36cda5222aba364b (request ID: 0) after trigger
~:43.204791 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 3988bc20c2b2e40c (request ID: 0) before
~:43.205689 I | etcdserver/membership: added member 3988bc20c2b2e40c [unix://127.0.0.1:2101113646] to cluster 425d73f1b7b01674
~:43.205783 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 3988bc20c2b2e40c (request ID: 0) after
~:43.205929 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 3988bc20c2b2e40c (request ID: 0) after trigger
~:43.206056 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on cf5d6cbc2a121727 (request ID: 0) before
~:43.207353 I | etcdserver/membership: added member cf5d6cbc2a121727 [unix://127.0.0.1:2100713646] to cluster 425d73f1b7b01674
~:43.207516 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on cf5d6cbc2a121727 (request ID: 0) after
~:43.207619 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on cf5d6cbc2a121727 (request ID: 0) after trigger
~:43.207710 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished scheduled conf change on 36cda5222aba364b
~:43.207781 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished scheduled conf change on 3988bc20c2b2e40c
~:43.207843 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished scheduled conf change on cf5d6cbc2a121727
~:43.207951 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished wait for 0 pending jobs (current pending 0, finished 1)
~:43.208029 I | rafthttp: started HTTP pipelining with peer cf5d6cbc2a121727
~:43.210339 I | rafthttp: peer 3988bc20c2b2e40c became active
~:43.210435 I | rafthttp: established a TCP streaming connection with peer 3988bc20c2b2e40c (stream MsgApp v2 reader)
~:43.210861 I | rafthttp: started streaming with peer 3988bc20c2b2e40c (writer)
~:43.211732 I | etcdserver: [DEBUG] 3988bc20c2b2e40c waitForApply after
```

Signed-off-by: Gyu-Ho Lee <gyuhox@gmail.com>
gyuho added a commit to gyuho/etcd that referenced this issue Apr 25, 2017
Problem is:

`Step1`: `etcdserver/raft.go`'s `Ready` process routine sends config-change entries via `r.applyc <- ap` (https://github.com/coreos/etcd/blob/master/etcdserver/raft.go#L193-L203)

`Step2`: `etcdserver/server.go`'s `*EtcdServer.run` routine receives this via `ap := <-s.r.apply()` (https://github.com/coreos/etcd/blob/master/etcdserver/server.go#L735-L738)

`StepA`: `Step1` proceeds without sync, right after sending `r.applyc <- ap`.

`StepB`: `Step2` proceeds without sync, right after `sched.Schedule(s.applyAll(&ep,&ap))`.

`StepC`: `etcdserver` tries to sync with `s.applyAll(&ep,&ap)` by calling `rh.waitForApply()`.

`rh.waitForApply()` waits for all pending jobs to finish in `pkg/schedule`
side. However, the order of `StepA`,`StepB`,`StepC` is not guaranteed. It
is possible that `StepC` happens first, and proceeds without waiting on
apply. And the restarting member comes back as a leader in single-node
cluster, when there is no synchronization between apply-layer and
config-change Raft entry apply. Confirmed with more debugging lines below,
only reproducible with slow CPU VM (~2 vCPU).

```
~:24.005397 I | etcdserver: starting server... [version: 3.2.0+git, cluster version: to_be_decided]
~:24.011136 I | etcdserver: [DEBUG] 29b2d24047a277df waitForApply before
~:24.011194 I | etcdserver: [DEBUG] 29b2d24047a277df starts wait for 0 pending jobs
~:24.011234 I | etcdserver: [DEBUG] 29b2d24047a277df finished wait for 0 pending jobs (current pending 0)
~:24.011268 I | etcdserver: [DEBUG] 29b2d24047a277df waitForApply after
~:24.011348 I | etcdserver: [DEBUG] [0] 29b2d24047a277df is scheduling conf change on 29b2d24047a277df
~:24.011396 I | etcdserver: [DEBUG] [1] 29b2d24047a277df is scheduling conf change on 5edf80e32a334cf0
~:24.011437 I | etcdserver: [DEBUG] [2] 29b2d24047a277df is scheduling conf change on e32e31e76c8d2678
~:24.011477 I | etcdserver: [DEBUG] 29b2d24047a277df scheduled conf change on 29b2d24047a277df
~:24.011509 I | etcdserver: [DEBUG] 29b2d24047a277df scheduled conf change on 5edf80e32a334cf0
~:24.011545 I | etcdserver: [DEBUG] 29b2d24047a277df scheduled conf change on e32e31e76c8d2678
~:24.012500 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 29b2d24047a277df before
~:24.013014 I | etcdserver/membership: added member 29b2d24047a277df [unix://127.0.0.1:2100515039] to cluster 9250d4ae34216949
~:24.013066 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 29b2d24047a277df after
~:24.013113 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 29b2d24047a277df after trigger
~:24.013158 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 5edf80e32a334cf0 before
~:24.013666 W | etcdserver: failed to send out heartbeat on time (exceeded the 10ms timeout for 11.964739ms)
~:24.013709 W | etcdserver: server is likely overloaded
~:24.013750 W | etcdserver: failed to send out heartbeat on time (exceeded the 10ms timeout for 12.057265ms)
~:24.013775 W | etcdserver: server is likely overloaded
~:24.013950 I | raft: 29b2d24047a277df is starting a new election at term 4
~:24.014012 I | raft: 29b2d24047a277df became candidate at term 5
~:24.014051 I | raft: 29b2d24047a277df received MsgVoteResp from 29b2d24047a277df at term 5
~:24.014107 I | raft: 29b2d24047a277df became leader at term 5
~:24.014146 I | raft: raft.node: 29b2d24047a277df elected leader 29b2d24047a277df at term 5
```

I am printing out the number of pending jobs before we call
`sched.WaitFinish(0)`, and there was no pending jobs, so it returned
immediately (before we schedule `applyAll`).

This is the root cause to:

- etcd-io#7595
- etcd-io#7739
- etcd-io#7802

`sched.WaitFinish(0)` doesn't work when `len(f.pendings)==0` and
`f.finished==0`. Config-change is the first job to apply, so
`f.finished` is 0 in this case.

`f.finished` monotonically increases, so we need `WaitFinish(finished+1)`.
And `finished` must be the one before calling `Schedule`. This is safe
because `Schedule(applyAll)` is the only place adding jobs to `sched`.
Then scheduler waits on the single job of `applyAll`, by getting the
current number of finished jobs before sending `Schedule`.

Or just make it be blocked until 'applyAll' routine triggers on the
config-change job. This patch just removes 'waitForApply', and
signal 'raftDone' to wait until applyAll finishes applying entries.

Confirmed that it fixes the issue, as below:

```
~:43.198354 I | rafthttp: started streaming with peer 36cda5222aba364b (stream MsgApp v2 reader)
~:43.198740 I | etcdserver: [DEBUG] 3988bc20c2b2e40c waitForApply before
~:43.198836 I | etcdserver: [DEBUG] 3988bc20c2b2e40c starts wait for 0 pending jobs, 1 finished jobs
~:43.200696 I | integration: launched 3169361310155633349 ()
~:43.201784 I | etcdserver: [DEBUG] [0] 3988bc20c2b2e40c is scheduling conf change on 36cda5222aba364b
~:43.201884 I | etcdserver: [DEBUG] [1] 3988bc20c2b2e40c is scheduling conf change on 3988bc20c2b2e40c
~:43.201965 I | etcdserver: [DEBUG] [2] 3988bc20c2b2e40c is scheduling conf change on cf5d6cbc2a121727
~:43.202070 I | etcdserver: [DEBUG] 3988bc20c2b2e40c scheduled conf change on 36cda5222aba364b
~:43.202139 I | etcdserver: [DEBUG] 3988bc20c2b2e40c scheduled conf change on 3988bc20c2b2e40c
~:43.202204 I | etcdserver: [DEBUG] 3988bc20c2b2e40c scheduled conf change on cf5d6cbc2a121727
~:43.202444 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 36cda5222aba364b (request ID: 0) before
~:43.204486 I | etcdserver/membership: added member 36cda5222aba364b [unix://127.0.0.1:2100913646] to cluster 425d73f1b7b01674
~:43.204588 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 36cda5222aba364b (request ID: 0) after
~:43.204703 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 36cda5222aba364b (request ID: 0) after trigger
~:43.204791 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 3988bc20c2b2e40c (request ID: 0) before
~:43.205689 I | etcdserver/membership: added member 3988bc20c2b2e40c [unix://127.0.0.1:2101113646] to cluster 425d73f1b7b01674
~:43.205783 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 3988bc20c2b2e40c (request ID: 0) after
~:43.205929 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 3988bc20c2b2e40c (request ID: 0) after trigger
~:43.206056 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on cf5d6cbc2a121727 (request ID: 0) before
~:43.207353 I | etcdserver/membership: added member cf5d6cbc2a121727 [unix://127.0.0.1:2100713646] to cluster 425d73f1b7b01674
~:43.207516 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on cf5d6cbc2a121727 (request ID: 0) after
~:43.207619 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on cf5d6cbc2a121727 (request ID: 0) after trigger
~:43.207710 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished scheduled conf change on 36cda5222aba364b
~:43.207781 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished scheduled conf change on 3988bc20c2b2e40c
~:43.207843 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished scheduled conf change on cf5d6cbc2a121727
~:43.207951 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished wait for 0 pending jobs (current pending 0, finished 1)
~:43.208029 I | rafthttp: started HTTP pipelining with peer cf5d6cbc2a121727
~:43.210339 I | rafthttp: peer 3988bc20c2b2e40c became active
~:43.210435 I | rafthttp: established a TCP streaming connection with peer 3988bc20c2b2e40c (stream MsgApp v2 reader)
~:43.210861 I | rafthttp: started streaming with peer 3988bc20c2b2e40c (writer)
~:43.211732 I | etcdserver: [DEBUG] 3988bc20c2b2e40c waitForApply after
```

Signed-off-by: Gyu-Ho Lee <gyuhox@gmail.com>
gyuho added a commit to gyuho/etcd that referenced this issue Apr 25, 2017
Problem is:

`Step1`: `etcdserver/raft.go`'s `Ready` process routine sends config-change entries via `r.applyc <- ap` (https://github.com/coreos/etcd/blob/master/etcdserver/raft.go#L193-L203)

`Step2`: `etcdserver/server.go`'s `*EtcdServer.run` routine receives this via `ap := <-s.r.apply()` (https://github.com/coreos/etcd/blob/master/etcdserver/server.go#L735-L738)

`StepA`: `Step1` proceeds without sync, right after sending `r.applyc <- ap`.

`StepB`: `Step2` proceeds without sync, right after `sched.Schedule(s.applyAll(&ep,&ap))`.

`StepC`: `etcdserver` tries to sync with `s.applyAll(&ep,&ap)` by calling `rh.waitForApply()`.

`rh.waitForApply()` waits for all pending jobs to finish in `pkg/schedule`
side. However, the order of `StepA`,`StepB`,`StepC` is not guaranteed. It
is possible that `StepC` happens first, and proceeds without waiting on
apply. And the restarting member comes back as a leader in single-node
cluster, when there is no synchronization between apply-layer and
config-change Raft entry apply. Confirmed with more debugging lines below,
only reproducible with slow CPU VM (~2 vCPU).

```
~:24.005397 I | etcdserver: starting server... [version: 3.2.0+git, cluster version: to_be_decided]
~:24.011136 I | etcdserver: [DEBUG] 29b2d24047a277df waitForApply before
~:24.011194 I | etcdserver: [DEBUG] 29b2d24047a277df starts wait for 0 pending jobs
~:24.011234 I | etcdserver: [DEBUG] 29b2d24047a277df finished wait for 0 pending jobs (current pending 0)
~:24.011268 I | etcdserver: [DEBUG] 29b2d24047a277df waitForApply after
~:24.011348 I | etcdserver: [DEBUG] [0] 29b2d24047a277df is scheduling conf change on 29b2d24047a277df
~:24.011396 I | etcdserver: [DEBUG] [1] 29b2d24047a277df is scheduling conf change on 5edf80e32a334cf0
~:24.011437 I | etcdserver: [DEBUG] [2] 29b2d24047a277df is scheduling conf change on e32e31e76c8d2678
~:24.011477 I | etcdserver: [DEBUG] 29b2d24047a277df scheduled conf change on 29b2d24047a277df
~:24.011509 I | etcdserver: [DEBUG] 29b2d24047a277df scheduled conf change on 5edf80e32a334cf0
~:24.011545 I | etcdserver: [DEBUG] 29b2d24047a277df scheduled conf change on e32e31e76c8d2678
~:24.012500 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 29b2d24047a277df before
~:24.013014 I | etcdserver/membership: added member 29b2d24047a277df [unix://127.0.0.1:2100515039] to cluster 9250d4ae34216949
~:24.013066 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 29b2d24047a277df after
~:24.013113 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 29b2d24047a277df after trigger
~:24.013158 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 5edf80e32a334cf0 before
~:24.013666 W | etcdserver: failed to send out heartbeat on time (exceeded the 10ms timeout for 11.964739ms)
~:24.013709 W | etcdserver: server is likely overloaded
~:24.013750 W | etcdserver: failed to send out heartbeat on time (exceeded the 10ms timeout for 12.057265ms)
~:24.013775 W | etcdserver: server is likely overloaded
~:24.013950 I | raft: 29b2d24047a277df is starting a new election at term 4
~:24.014012 I | raft: 29b2d24047a277df became candidate at term 5
~:24.014051 I | raft: 29b2d24047a277df received MsgVoteResp from 29b2d24047a277df at term 5
~:24.014107 I | raft: 29b2d24047a277df became leader at term 5
~:24.014146 I | raft: raft.node: 29b2d24047a277df elected leader 29b2d24047a277df at term 5
```

I am printing out the number of pending jobs before we call
`sched.WaitFinish(0)`, and there was no pending jobs, so it returned
immediately (before we schedule `applyAll`).

This is the root cause to:

- etcd-io#7595
- etcd-io#7739
- etcd-io#7802

`sched.WaitFinish(0)` doesn't work when `len(f.pendings)==0` and
`f.finished==0`. Config-change is the first job to apply, so
`f.finished` is 0 in this case.

`f.finished` monotonically increases, so we need `WaitFinish(finished+1)`.
And `finished` must be the one before calling `Schedule`. This is safe
because `Schedule(applyAll)` is the only place adding jobs to `sched`.
Then scheduler waits on the single job of `applyAll`, by getting the
current number of finished jobs before sending `Schedule`.

Or just make it be blocked until `applyAll` routine triggers on the
config-change job. This patch just removes `waitForApply`, and
signal `raftDone` to wait until `applyAll` finishes applying entries.

Confirmed that it fixes the issue, as below:

```
~:43.198354 I | rafthttp: started streaming with peer 36cda5222aba364b (stream MsgApp v2 reader)
~:43.198740 I | etcdserver: [DEBUG] 3988bc20c2b2e40c waitForApply before
~:43.198836 I | etcdserver: [DEBUG] 3988bc20c2b2e40c starts wait for 0 pending jobs, 1 finished jobs
~:43.200696 I | integration: launched 3169361310155633349 ()
~:43.201784 I | etcdserver: [DEBUG] [0] 3988bc20c2b2e40c is scheduling conf change on 36cda5222aba364b
~:43.201884 I | etcdserver: [DEBUG] [1] 3988bc20c2b2e40c is scheduling conf change on 3988bc20c2b2e40c
~:43.201965 I | etcdserver: [DEBUG] [2] 3988bc20c2b2e40c is scheduling conf change on cf5d6cbc2a121727
~:43.202070 I | etcdserver: [DEBUG] 3988bc20c2b2e40c scheduled conf change on 36cda5222aba364b
~:43.202139 I | etcdserver: [DEBUG] 3988bc20c2b2e40c scheduled conf change on 3988bc20c2b2e40c
~:43.202204 I | etcdserver: [DEBUG] 3988bc20c2b2e40c scheduled conf change on cf5d6cbc2a121727
~:43.202444 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 36cda5222aba364b (request ID: 0) before
~:43.204486 I | etcdserver/membership: added member 36cda5222aba364b [unix://127.0.0.1:2100913646] to cluster 425d73f1b7b01674
~:43.204588 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 36cda5222aba364b (request ID: 0) after
~:43.204703 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 36cda5222aba364b (request ID: 0) after trigger
~:43.204791 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 3988bc20c2b2e40c (request ID: 0) before
~:43.205689 I | etcdserver/membership: added member 3988bc20c2b2e40c [unix://127.0.0.1:2101113646] to cluster 425d73f1b7b01674
~:43.205783 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 3988bc20c2b2e40c (request ID: 0) after
~:43.205929 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 3988bc20c2b2e40c (request ID: 0) after trigger
~:43.206056 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on cf5d6cbc2a121727 (request ID: 0) before
~:43.207353 I | etcdserver/membership: added member cf5d6cbc2a121727 [unix://127.0.0.1:2100713646] to cluster 425d73f1b7b01674
~:43.207516 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on cf5d6cbc2a121727 (request ID: 0) after
~:43.207619 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on cf5d6cbc2a121727 (request ID: 0) after trigger
~:43.207710 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished scheduled conf change on 36cda5222aba364b
~:43.207781 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished scheduled conf change on 3988bc20c2b2e40c
~:43.207843 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished scheduled conf change on cf5d6cbc2a121727
~:43.207951 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished wait for 0 pending jobs (current pending 0, finished 1)
~:43.208029 I | rafthttp: started HTTP pipelining with peer cf5d6cbc2a121727
~:43.210339 I | rafthttp: peer 3988bc20c2b2e40c became active
~:43.210435 I | rafthttp: established a TCP streaming connection with peer 3988bc20c2b2e40c (stream MsgApp v2 reader)
~:43.210861 I | rafthttp: started streaming with peer 3988bc20c2b2e40c (writer)
~:43.211732 I | etcdserver: [DEBUG] 3988bc20c2b2e40c waitForApply after
```

Signed-off-by: Gyu-Ho Lee <gyuhox@gmail.com>
gyuho added a commit to gyuho/etcd that referenced this issue Apr 25, 2017
Problem is:

`Step1`: `etcdserver/raft.go`'s `Ready` process routine sends config-change entries via `r.applyc <- ap` (https://github.com/coreos/etcd/blob/master/etcdserver/raft.go#L193-L203)

`Step2`: `etcdserver/server.go`'s `*EtcdServer.run` routine receives this via `ap := <-s.r.apply()` (https://github.com/coreos/etcd/blob/master/etcdserver/server.go#L735-L738)

`StepA`: `Step1` proceeds without sync, right after sending `r.applyc <- ap`.

`StepB`: `Step2` proceeds without sync, right after `sched.Schedule(s.applyAll(&ep,&ap))`.

`StepC`: `etcdserver` tries to sync with `s.applyAll(&ep,&ap)` by calling `rh.waitForApply()`.

`rh.waitForApply()` waits for all pending jobs to finish in `pkg/schedule`
side. However, the order of `StepA`,`StepB`,`StepC` is not guaranteed. It
is possible that `StepC` happens first, and proceeds without waiting on
apply. And the restarting member comes back as a leader in single-node
cluster, when there is no synchronization between apply-layer and
config-change Raft entry apply. Confirmed with more debugging lines below,
only reproducible with slow CPU VM (~2 vCPU).

```
~:24.005397 I | etcdserver: starting server... [version: 3.2.0+git, cluster version: to_be_decided]
~:24.011136 I | etcdserver: [DEBUG] 29b2d24047a277df waitForApply before
~:24.011194 I | etcdserver: [DEBUG] 29b2d24047a277df starts wait for 0 pending jobs
~:24.011234 I | etcdserver: [DEBUG] 29b2d24047a277df finished wait for 0 pending jobs (current pending 0)
~:24.011268 I | etcdserver: [DEBUG] 29b2d24047a277df waitForApply after
~:24.011348 I | etcdserver: [DEBUG] [0] 29b2d24047a277df is scheduling conf change on 29b2d24047a277df
~:24.011396 I | etcdserver: [DEBUG] [1] 29b2d24047a277df is scheduling conf change on 5edf80e32a334cf0
~:24.011437 I | etcdserver: [DEBUG] [2] 29b2d24047a277df is scheduling conf change on e32e31e76c8d2678
~:24.011477 I | etcdserver: [DEBUG] 29b2d24047a277df scheduled conf change on 29b2d24047a277df
~:24.011509 I | etcdserver: [DEBUG] 29b2d24047a277df scheduled conf change on 5edf80e32a334cf0
~:24.011545 I | etcdserver: [DEBUG] 29b2d24047a277df scheduled conf change on e32e31e76c8d2678
~:24.012500 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 29b2d24047a277df before
~:24.013014 I | etcdserver/membership: added member 29b2d24047a277df [unix://127.0.0.1:2100515039] to cluster 9250d4ae34216949
~:24.013066 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 29b2d24047a277df after
~:24.013113 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 29b2d24047a277df after trigger
~:24.013158 I | etcdserver: [DEBUG] 29b2d24047a277df applyConfChange on 5edf80e32a334cf0 before
~:24.013666 W | etcdserver: failed to send out heartbeat on time (exceeded the 10ms timeout for 11.964739ms)
~:24.013709 W | etcdserver: server is likely overloaded
~:24.013750 W | etcdserver: failed to send out heartbeat on time (exceeded the 10ms timeout for 12.057265ms)
~:24.013775 W | etcdserver: server is likely overloaded
~:24.013950 I | raft: 29b2d24047a277df is starting a new election at term 4
~:24.014012 I | raft: 29b2d24047a277df became candidate at term 5
~:24.014051 I | raft: 29b2d24047a277df received MsgVoteResp from 29b2d24047a277df at term 5
~:24.014107 I | raft: 29b2d24047a277df became leader at term 5
~:24.014146 I | raft: raft.node: 29b2d24047a277df elected leader 29b2d24047a277df at term 5
```

I am printing out the number of pending jobs before we call
`sched.WaitFinish(0)`, and there was no pending jobs, so it returned
immediately (before we schedule `applyAll`).

This is the root cause to:

- etcd-io#7595
- etcd-io#7739
- etcd-io#7802

`sched.WaitFinish(0)` doesn't work when `len(f.pendings)==0` and
`f.finished==0`. Config-change is the first job to apply, so
`f.finished` is 0 in this case.

`f.finished` monotonically increases, so we need `WaitFinish(finished+1)`.
And `finished` must be the one before calling `Schedule`. This is safe
because `Schedule(applyAll)` is the only place adding jobs to `sched`.
Then scheduler waits on the single job of `applyAll`, by getting the
current number of finished jobs before sending `Schedule`.

Or just make it be blocked until `applyAll` routine triggers on the
config-change job. This patch just removes `waitForApply`, and
signal `raftDone` to wait until `applyAll` finishes applying entries.

Confirmed that it fixes the issue, as below:

```
~:43.198354 I | rafthttp: started streaming with peer 36cda5222aba364b (stream MsgApp v2 reader)
~:43.198740 I | etcdserver: [DEBUG] 3988bc20c2b2e40c waitForApply before
~:43.198836 I | etcdserver: [DEBUG] 3988bc20c2b2e40c starts wait for 0 pending jobs, 1 finished jobs
~:43.200696 I | integration: launched 3169361310155633349 ()
~:43.201784 I | etcdserver: [DEBUG] [0] 3988bc20c2b2e40c is scheduling conf change on 36cda5222aba364b
~:43.201884 I | etcdserver: [DEBUG] [1] 3988bc20c2b2e40c is scheduling conf change on 3988bc20c2b2e40c
~:43.201965 I | etcdserver: [DEBUG] [2] 3988bc20c2b2e40c is scheduling conf change on cf5d6cbc2a121727
~:43.202070 I | etcdserver: [DEBUG] 3988bc20c2b2e40c scheduled conf change on 36cda5222aba364b
~:43.202139 I | etcdserver: [DEBUG] 3988bc20c2b2e40c scheduled conf change on 3988bc20c2b2e40c
~:43.202204 I | etcdserver: [DEBUG] 3988bc20c2b2e40c scheduled conf change on cf5d6cbc2a121727
~:43.202444 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 36cda5222aba364b (request ID: 0) before
~:43.204486 I | etcdserver/membership: added member 36cda5222aba364b [unix://127.0.0.1:2100913646] to cluster 425d73f1b7b01674
~:43.204588 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 36cda5222aba364b (request ID: 0) after
~:43.204703 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 36cda5222aba364b (request ID: 0) after trigger
~:43.204791 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 3988bc20c2b2e40c (request ID: 0) before
~:43.205689 I | etcdserver/membership: added member 3988bc20c2b2e40c [unix://127.0.0.1:2101113646] to cluster 425d73f1b7b01674
~:43.205783 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 3988bc20c2b2e40c (request ID: 0) after
~:43.205929 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on 3988bc20c2b2e40c (request ID: 0) after trigger
~:43.206056 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on cf5d6cbc2a121727 (request ID: 0) before
~:43.207353 I | etcdserver/membership: added member cf5d6cbc2a121727 [unix://127.0.0.1:2100713646] to cluster 425d73f1b7b01674
~:43.207516 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on cf5d6cbc2a121727 (request ID: 0) after
~:43.207619 I | etcdserver: [DEBUG] 3988bc20c2b2e40c applyConfChange on cf5d6cbc2a121727 (request ID: 0) after trigger
~:43.207710 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished scheduled conf change on 36cda5222aba364b
~:43.207781 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished scheduled conf change on 3988bc20c2b2e40c
~:43.207843 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished scheduled conf change on cf5d6cbc2a121727
~:43.207951 I | etcdserver: [DEBUG] 3988bc20c2b2e40c finished wait for 0 pending jobs (current pending 0, finished 1)
~:43.208029 I | rafthttp: started HTTP pipelining with peer cf5d6cbc2a121727
~:43.210339 I | rafthttp: peer 3988bc20c2b2e40c became active
~:43.210435 I | rafthttp: established a TCP streaming connection with peer 3988bc20c2b2e40c (stream MsgApp v2 reader)
~:43.210861 I | rafthttp: started streaming with peer 3988bc20c2b2e40c (writer)
~:43.211732 I | etcdserver: [DEBUG] 3988bc20c2b2e40c waitForApply after
```

Signed-off-by: Gyu-Ho Lee <gyuhox@gmail.com>
@gyuho
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gyuho commented Apr 25, 2017

Fixed via #7810.

@gyuho gyuho closed this as completed Apr 25, 2017
spzala added a commit to spzala/etcd that referenced this issue Mar 16, 2024
Temporary move to using etcd maintainers mailing list
from security@etcd.io.

Related etcd-io#7739

Signed-off-by: Sahdev Zala <spzala@us.ibm.com>
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