Skip to content
Integrative Methylation Association with Genotypes
Branch: master
Clone or download
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Permalink
Type Name Latest commit message Commit time
Failed to load latest commit information.
R
data
man
src
.gitattributes
DESCRIPTION
Data processing steps.md
IMAGE_1.0.tar.gz
NAMESPACE
README.md

README.md

IMAGE

mQTL mapping in bisulfite sequencing studies by fitting a binomial mixed model, incorporating allelic-specific methylation pattern.

Installation

It is easy to install the development version of MethylQTL package using the 'devtools' package.

library(devtools)
install_github("3211895/IMAGE")

Usage

The main function is image. You can find the instructions and an example by '?image'.

Example:

data(ExampleData)
res=image(geno,data,K)

Results reproduced

All the results from all methods used in the PMR-Egger paper can be reproduced at https://github.com/3211895/IMAGEreproduce

You can’t perform that action at this time.