@fiji

Fiji is just ImageJ

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TrackMate

TrackMate is your buddy for your everyday tracking.

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dotfiles

Configuration files for Fiji resources.

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fiji

Fiji Is Just ImageJ. ***WARNING*** this repository is intended for *developers*! If you want to *use* Fiji, please download it from: http://fiji.sc/Downloads

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pom-fiji

The parent project for all Fiji projects

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Java 0 0

h5j_loader-plugin

H5J Reader Plugin for Fiji project.

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IO

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Java 1 0

TrackMate3

This is the prototype code for the 3rd version of TrackMate, planned for mid 2017.

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Java 1 2

3D_Viewer

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Java 0 0

bUnwarpJ

ImageJ/Fiji plugin for consistent elastic registration of 2D images

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Trainable_Segmentation

Fiji library to perform image segmentation based on the Weka learning schemes

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Java 0 1

Interactive_3D_Surface_Plot

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Java 1 1

Volume_Calculator

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Stitching

Fiji's Stitching plugins reconstruct big images from tiled input images.

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Java 0 6

VIB-lib

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Java 0 1

TransformJ

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Java 0 0

SplineDeformationGenerator

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Java 0 1

Skeletonize3D

ImageJ/Fiji plugin to skeletonize binary images

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Java 0 0

Siox_Segmentation

Fiji plugin based on the SIOX project to segment color images

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Java 0 5

AnalyzeSkeleton

ImageJ/Fiji plugin to analyze 2D and 3D skeleton images

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Java 0 2

Time_Lapse

A set of tools intended to help with time-lapse data

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