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SPIM_Registration

Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data

Updated

Java 0 0

Cross_Fader

An ImageJ 1.x plugin that takes a two-slice stack and copies part of the second slice into the current one.

Updated

Java 1 8

IO

Updated

fiji

A "batteries-included" distribution of ImageJ

Updated

Java 0 1

Stack_Manipulation

Updated

Stitching

Fiji's Stitching plugins reconstruct big images from tiled input images.

Updated

Trainable_Segmentation

Fiji library to perform image segmentation based on the Weka learning schemes

Updated

Java 1 0

TrackMate3

This is the prototype code for the 3rd version of TrackMate, planned for mid 2017.

Updated

Java 2 4

3D_Viewer

Updated

Java 1 0

Siox_Segmentation

Fiji plugin based on the SIOX project to segment color images

Updated

Java 0 1

Manual_Tracking

Updated

Java 1 3

Simple_Neurite_Tracer

Updated

Java 1 4

Volume_Calculator

Updated

pom-fiji

The parent project for all Fiji projects

Updated

Java 0 0

SPIM_Opener

Updated

Java 0 0

Series_Labeler

Updated

Java 0 1

M_I_P

Updated

Java 2 3

Skeletonize3D

ImageJ/Fiji plugin to skeletonize binary images

Updated

Java 0 0

bij

Bio-medical imaging in Java

Updated

Java 2 2

panorama

Updated

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