Merge pull request #110 from funkelab/105-remove-plotly-plotting

105 remove plotly plotting
funkelab · Aug 13, 2024 · 825a461 · 825a461
2 parents f76a5f6 + 9b995a8
commit 825a461
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Showing 7 changed files with 8 additions and 393 deletions.
diff --git a/docs/source/extending.rst b/docs/source/extending.rst
@@ -63,7 +63,7 @@ object and each edge a potential link of objects between frames:
 
 .. jupyter-execute::
 
-  from motile.plot import draw_track_graph
+  from motile_toolbox.visualization import draw_track_graph
 
   draw_track_graph(graph, alpha_attribute="score", label_attribute="score")
 
@@ -94,7 +94,7 @@ model is:
 
 .. jupyter-execute::
 
-  from motile.plot import draw_solution
+  from motile_toolbox.visualization import draw_solution
 
   draw_solution(graph, solver, label_attribute="score")
 

diff --git a/docs/source/index.rst b/docs/source/index.rst
@@ -22,7 +22,7 @@ object and each edge a potential link of objects between frames:
 
   import motile
   from motile.variables import NodeSelected, EdgeSelected
-  from motile.plot import draw_track_graph, draw_solution
+  from motile_toolbox.visualization import draw_track_graph, draw_solution
 
 
 .. jupyter-execute::

diff --git a/docs/source/learning.rst b/docs/source/learning.rst
@@ -71,7 +71,7 @@ object and each edge a potential link of objects between frames:
 
 .. jupyter-execute::
 
-  from motile.plot import draw_track_graph
+  from motile_toolbox.visualization import draw_track_graph
 
   draw_track_graph(graph, alpha_attribute="score", label_attribute="score")
 
@@ -144,7 +144,7 @@ Our initial weights are just a guess, let's solve...
   :hide-output:
 
   from motile.variables import NodeSelected, EdgeSelected
-  from motile.plot import draw_solution
+  from motile_toolbox.visualization import draw_solution
 
   solver.solve()
 

diff --git a/docs/source/quickstart.rst b/docs/source/quickstart.rst
@@ -56,7 +56,7 @@ object and each edge a potential link of objects between frames:
 .. jupyter-execute::
 
   import motile
-  from motile.plot import draw_track_graph, draw_solution
+  from motile_toolbox.visualization import draw_track_graph, draw_solution
 
   draw_track_graph(graph, alpha_attribute='score', label_attribute='score')
 

diff --git a/motile/plot.py b/motile/plot.py