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Small enhancements for collection builders #3806



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commented Mar 22, 2017

  • Allow the use of the list and paired collection builders for non-terminal datasets (e.g. 'new', 'queued', etc...). This is needed ahead of collection uploading and the paired list builder already allowed it anyway.
  • Add option to all collection builders to hide the original datasets. This is a common usage pattern - so we should support it. Should help mitigate certain problems caused by large histories.
  • Extend API and API tests to support this new operation of hiding the original datasets.
  • Extend test case coverage for collection builders and some work on general Selenium test improvements.
    • Add simple test case for paired list creation.
    • Add test cases for creating lists and paired lists when hiding the original datasets (new functionality in this PR).
    • Add a new retry action decorator to certain Selenium operations to try to make testing more robust in general.

jmchilton added some commits Mar 24, 2017

Allow non-ready jobs in collection builder.
This includes two parallel changes to the Selenium tests.

- It adds a decorator to allow retrying certain atomic actions that may occur during jQuery transitions automatically.
- It refactors things to allow waiting on HIDs to become visible instead of just green.
Fix transiently failing Selenium test of tool form re-running.
Reworks addition of staleness checkers introduced in #3780.
More test cases for collection builders.
- Add test case for building paired lists.
- Add tests for new hide original datasets functionality for lists and paired lists.

@jmchilton jmchilton force-pushed the jmchilton:collection_builder_enhancements branch from 759aa4b to 82ca693 Mar 24, 2017


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commented Mar 27, 2017

thanks @jmchilton
I found minor issue while testing (#3827) but this PR did not introduce it.

@martenson martenson merged commit db09acb into galaxyproject:dev Mar 27, 2017

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api test Test started.
continuous-integration/travis-ci/pr The Travis CI build is in progress
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integration test Test started.
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commented Mar 28, 2017

Awesome sauce - thanks for the merge and thanks for creating #3827.

@jmchilton jmchilton deleted the jmchilton:collection_builder_enhancements branch Mar 28, 2017

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