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minor tweaks to the man page for vegandevs#300
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gavinsimpson committed Sep 28, 2022
1 parent b0a55e7 commit f046057
Showing 1 changed file with 6 additions and 2 deletions.
8 changes: 6 additions & 2 deletions man/betadisper.Rd
Original file line number Diff line number Diff line change
Expand Up @@ -89,8 +89,8 @@ betadisper(d, group, type = c("median","centroid"), bias.adjust = FALSE,
to provide the requested coverage (probability contour).}
\item{pch}{plot symbols for the groups, a vector of length equal to
the number of groups.}
\item{col}{colors for the plot symbols for the groups, a vector of
length equal to the number of groups.}
\item{col}{colors for the plot symbols and centroid labels for the groups,
a vector of length equal to the number of groups.}
\item{lty, lwd}{linetype, linewidth for convex hulls and confidence
ellipses.}
\item{segments}{logical; should segments joining points to their
Expand Down Expand Up @@ -293,6 +293,10 @@ plot(mod)
plot(mod, ellipse = TRUE, hull = FALSE) # 1 sd data ellipse
plot(mod, ellipse = TRUE, hull = FALSE, conf = 0.90) # 90% data ellipse

# plot with manual colour specification
my_cols <- c("#1b9e77", "#7570b3")
plot(mod, col = my_cols, pch = c(16,17), cex = 1.1)

## can also specify which axes to plot, ordering respected
plot(mod, axes = c(3,1), seg.col = "forestgreen", seg.lty = "dashed")

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