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Just one example: the second figure in Chapter 3's "Basic Merging" section looks like this (linked straight from that site):
…and should look like this (also linked from source):
Note the redundant C5 in the git-scm.com figure. There have been a number of fixes to the figures since these images were first generated, we should probably re-do whatever it is was done to bring them over in the first place. @schacon, do you still have the script you used for this?