gripss v2.4
charlesshale
released this
05 Feb 03:13
·
2335 commits
to master
since this release
Technical:
- handle Gridss VCF with sample IDs in reversed order
Panel:
- added panel soft filters: qual-per-AD and modified AF
- set panel config by default if in target regions mode
-hard_min_tumor_qual 200
-min_qual_break_point 1000
-min_qual_break_end 1000
-filter_sgls
-qual_per_ad 30
-modified_af 0.03
-modified_af_hotspot 0.005