update environment.yml and setup.py

environment.yml

@@ -9,9 +9,7 @@ dependencies:
   - mypy
   - pickle5
   - python=3.7.*
-  - scipy=1.4.*  # generic model dependency (not used by tiktorch itself)
   - paramiko=2.4.2
-  - inferno=v0.4.*
   - pillow=6.2.1
   - pyyaml=5.3
   - marshmallow=3.4.0
@@ -22,8 +20,14 @@ dependencies:
   - isort
   - conda-build
   - anaconda-client
-  - bump2version
   - pre_commit
+  # generic model dependency (not used by tiktorch itself)
+  - scipy=1.4.*
+  - inferno=v0.4.*
+  # pip dependencies
+  - pip
   - pip:
-      - pytest-grpc==0.7.0
-      - git+https://github.com/bioimage-io/python-bioimage-io#egg=pybio
+    - bump2version
+    - pytest-grpc==0.7.0
+    - git+https://github.com/bioimage-io/python-bioimage-io#egg=pybio
+    - git+https://github.com/bioimage-io/pytorch-bioimage-io#egg=pybio

setup.py

@@ -31,10 +31,9 @@
         "numpy",
         "pyyaml",
         "torch",
-        "pybio.core @ git+ssh://git@github.com/m-novikov/python-bioimage-io#egg=pybio.core",
-        "pybio.torch @ git+ssh://git@github.com/m-novikov/pytorch-bioimage-io#egg=pybio.torch",
+        "pybio.core @ git+ssh://git@github.com/bioimage-io/python-bioimage-io#egg=pybio.core",
+        "pybio.torch @ git+ssh://git@github.com/bioimage-io/pytorch-bioimage-io#egg=pybio.torch",
     ],
-    entry_points={"console_scripts": ["tiktorch=tiktorch.server.base:main"]},
     # extras_require={"test": ["pytest"]},
     project_urls={  # Optional
         "Bug Reports": "https://github.com/ilastik/tiktorch/issues",